Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
APOEP02649 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APOEP02649 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOEP02649 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APOEP02649 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
APOEP02649 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
APOEP02649 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOEP02649 LINC02019-201ENST00000608605 2060 ntBASIC6.15□□□□□ -1.42
APOEP02649 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOEP02649 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
APOEP02649 TMSB4XP2-201ENST00000335179 210 ntBASIC6.15□□□□□ -1.42
APOEP02649 RN7SKP77-201ENST00000363261 353 ntBASIC6.15□□□□□ -1.42
APOEP02649 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.15□□□□□ -1.42
APOEP02649 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
APOEP02649 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
APOEP02649 AL354890.1-201ENST00000413730 346 ntBASIC6.15□□□□□ -1.42
APOEP02649 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.15□□□□□ -1.42
APOEP02649 RPS4XP5-201ENST00000419038 768 ntBASIC6.15□□□□□ -1.42
APOEP02649 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.15□□□□□ -1.42
APOEP02649 NDUFS5P5-201ENST00000437256 321 ntBASIC6.15□□□□□ -1.42
APOEP02649 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.15□□□□□ -1.42
APOEP02649 AL663074.2-201ENST00000440621 479 ntBASIC6.15□□□□□ -1.42
APOEP02649 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.15□□□□□ -1.42
APOEP02649 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.15□□□□□ -1.42
APOEP02649 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.15□□□□□ -1.42
APOEP02649 PFN1P6-201ENST00000476786 399 ntBASIC6.15□□□□□ -1.42
APOEP02649 TRBV5-2-201ENST00000489095 273 ntBASIC6.15□□□□□ -1.42
APOEP02649 RN7SL57P-201ENST00000493687 290 ntBASIC6.15□□□□□ -1.42
APOEP02649 AC006499.4-201ENST00000510947 694 ntBASIC6.15□□□□□ -1.42
APOEP02649 AC114781.3-201ENST00000512083 142 ntBASIC6.15□□□□□ -1.42
APOEP02649 RN7SKP288-201ENST00000516227 268 ntBASIC6.15□□□□□ -1.42
APOEP02649 RNA5SP271-201ENST00000516700 88 ntBASIC6.15□□□□□ -1.42
APOEP02649 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.15□□□□□ -1.42
APOEP02649 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.15□□□□□ -1.42
APOEP02649 AC092121.1-201ENST00000569452 202 ntBASIC6.15□□□□□ -1.42
APOEP02649 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.15□□□□□ -1.42
APOEP02649 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.15□□□□□ -1.42
APOEP02649 AL445670.1-201ENST00000618889 801 ntBASIC6.15□□□□□ -1.42
APOEP02649 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.15□□□□□ -1.42
APOEP02649 AC129915.3-201ENST00000634128 948 ntBASIC6.15□□□□□ -1.42
APOEP02649 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.15□□□□□ -1.43
APOEP02649 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.15□□□□□ -1.43
APOEP02649 AC092070.2-203ENST00000598377 3644 ntBASIC6.15□□□□□ -1.43
APOEP02649 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
APOEP02649 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.15□□□□□ -1.43
APOEP02649 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
APOEP02649 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
APOEP02649 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
APOEP02649 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
APOEP02649 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
APOEP02649 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.14□□□□□ -1.43
APOEP02649 AP005435.3-201ENST00000531260 3198 ntBASIC6.14□□□□□ -1.43
APOEP02649 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
APOEP02649 OR7E25P-201ENST00000344844 931 ntBASIC6.14□□□□□ -1.43
APOEP02649 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
APOEP02649 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.14□□□□□ -1.43
APOEP02649 VN1R3-201ENST00000418822 919 ntBASIC6.14□□□□□ -1.43
APOEP02649 AL035660.1-201ENST00000422041 222 ntBASIC6.14□□□□□ -1.43
APOEP02649 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.14□□□□□ -1.43
APOEP02649 REREP1Y-201ENST00000422655 198 ntBASIC6.14□□□□□ -1.43
APOEP02649 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 AL590399.2-201ENST00000427536 309 ntBASIC6.14□□□□□ -1.43
APOEP02649 AC073410.1-201ENST00000435125 589 ntBASIC6.14□□□□□ -1.43
APOEP02649 REREP2Y-201ENST00000439103 200 ntBASIC6.14□□□□□ -1.43
APOEP02649 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOEP02649 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.14□□□□□ -1.43
APOEP02649 AC099521.1-201ENST00000482557 334 ntBASIC6.14□□□□□ -1.43
APOEP02649 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 TOMM22P4-201ENST00000511318 336 ntBASIC6.14□□□□□ -1.43
APOEP02649 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.14□□□□□ -1.43
APOEP02649 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOEP02649 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.14□□□□□ -1.43
APOEP02649 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.14□□□□□ -1.43
APOEP02649 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.14□□□□□ -1.43
APOEP02649 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.14□□□□□ -1.43
APOEP02649 GARSP1-201ENST00000570895 719 ntBASIC6.14□□□□□ -1.43
APOEP02649 TXNP4-201ENST00000575018 310 ntBASIC6.14□□□□□ -1.43
APOEP02649 FAM27E4-201ENST00000605259 342 ntBASIC6.14□□□□□ -1.43
APOEP02649 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.14□□□□□ -1.43
APOEP02649 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.14□□□□□ -1.43
APOEP02649 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOEP02649 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.14□□□□□ -1.43
APOEP02649 KYNUP3-201ENST00000574386 1341 ntBASIC6.14□□□□□ -1.43
APOEP02649 AC005261.6-201ENST00000623072 1387 ntBASIC6.14□□□□□ -1.43
APOEP02649 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOEP02649 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOEP02649 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms