Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.89□□□□□ -1.31
COL1A1P02452 AC116651.1-201ENST00000609724 556 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 AL359513.1-201ENST00000614364 557 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 RPSAP73-201ENST00000614820 330 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.89□□□□□ -1.31
COL1A1P02452 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.89□□□□□ -1.31
COL1A1P02452 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.88□□□□□ -1.31
COL1A1P02452 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL1A1P02452 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.88□□□□□ -1.31
COL1A1P02452 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL1A1P02452 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL1A1P02452 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL1A1P02452 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.88□□□□□ -1.31
COL1A1P02452 U3.2-201ENST00000362981 210 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.88□□□□□ -1.31
COL1A1P02452 RNA5SP91-201ENST00000390902 119 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AL133270.1-201ENST00000402635 279 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.88□□□□□ -1.31
COL1A1P02452 OR6D1P-201ENST00000436165 939 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AL450996.1-201ENST00000445574 1202 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.88□□□□□ -1.31
COL1A1P02452 AC087672.1-201ENST00000479876 766 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.88□□□□□ -1.31
COL1A1P02452 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.88□□□□□ -1.31
COL1A1P02452 CDC42P3-201ENST00000518493 633 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.88□□□□□ -1.31
COL1A1P02452 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 OR4A46P-201ENST00000527255 933 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AC139697.1-201ENST00000548429 745 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 AC004825.1-201ENST00000555068 586 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.88□□□□□ -1.31
COL1A1P02452 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.88□□□□□ -1.31
COL1A1P02452 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL1A1P02452 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL1A1P02452 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.88□□□□□ -1.31
COL1A1P02452 AP002991.2-201ENST00000623807 2801 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL1A1P02452 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.88□□□□□ -1.31
COL1A1P02452 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
COL1A1P02452 AC087516.1-201ENST00000561236 2428 ntBASIC6.88□□□□□ -1.31
COL1A1P02452 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL1A1P02452 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
COL1A1P02452 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.87□□□□□ -1.31
COL1A1P02452 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL1A1P02452 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL1A1P02452 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
COL1A1P02452 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL1A1P02452 AC009804.1-201ENST00000400949 179 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 AC073410.1-201ENST00000435125 589 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 RPS3AP38-201ENST00000435889 763 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.87□□□□□ -1.31
COL1A1P02452 RPS26P41-201ENST00000450370 284 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 RN7SL222P-201ENST00000476452 299 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.87□□□□□ -1.31
COL1A1P02452 AC253576.1-201ENST00000511645 1156 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.87□□□□□ -1.31
COL1A1P02452 AC021146.10-201ENST00000515628 706 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.87□□□□□ -1.31
COL1A1P02452 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.87□□□□□ -1.31
COL1A1P02452 HMGN2P6-201ENST00000551091 273 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 AC007346.2-201ENST00000564816 892 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.87□□□□□ -1.31
COL1A1P02452 MRPS21P7-201ENST00000566937 238 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.87□□□□□ -1.31
COL1A1P02452 AC024940.4-201ENST00000605507 246 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 AC025574.2-201ENST00000615621 514 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL1A1P02452 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.87□□□□□ -1.31
COL1A1P02452 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL1A1P02452 ZNF840P-201ENST00000504759 1996 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.87□□□□□ -1.31
COL1A1P02452 AP004607.3-201ENST00000530354 3915 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL1A1P02452 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COL1A1P02452 AL139805.2-201ENST00000455305 2433 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL1A1P02452 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL1A1P02452 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.87□□□□□ -1.31
COL1A1P02452 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL1A1P02452 METTL15P3-201ENST00000415522 1221 ntBASIC6.86□□□□□ -1.31
COL1A1P02452 LDHBP2-201ENST00000456969 1005 ntBASIC6.86□□□□□ -1.31
COL1A1P02452 OR10G5P-201ENST00000532733 358 ntBASIC6.86□□□□□ -1.31
COL1A1P02452 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL1A1P02452 AL121594.2-201ENST00000541658 472 ntBASIC6.86□□□□□ -1.31
COL1A1P02452 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.86□□□□□ -1.31
COL1A1P02452 AC012616.1-201ENST00000600294 197 ntBASIC6.86□□□□□ -1.31
COL1A1P02452 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.86□□□□□ -1.31
COL1A1P02452 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.86□□□□□ -1.31
COL1A1P02452 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.86□□□□□ -1.31
COL1A1P02452 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL1A1P02452 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL1A1P02452 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.86□□□□□ -1.31
COL1A1P02452 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL1A1P02452 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL1A1P02452 AL161912.4-201ENST00000623889 2468 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms