Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RN7SL791P-201ENST00000467868 295 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC8.35□□□□□ -1.07
HOXA2O43364 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HOXA2O43364 AC011352.3-201ENST00000505162 593 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 SAP18P1-201ENST00000512058 390 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 MTCYBP43-201ENST00000513621 740 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 RNU6-327P-201ENST00000516270 127 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 RN7SKP31-201ENST00000516354 278 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 AC239860.2-201ENST00000525886 270 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
HOXA2O43364 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC8.35□□□□□ -1.07
HOXA2O43364 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.35□□□□□ -1.07
HOXA2O43364 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC8.35□□□□□ -1.07
HOXA2O43364 AC012182.1-201ENST00000570133 895 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.35□□□□□ -1.07
HOXA2O43364 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.35□□□□□ -1.07
HOXA2O43364 MIR3159-201ENST00000584572 74 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.35□□□□□ -1.07
HOXA2O43364 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.35□□□□□ -1.07
HOXA2O43364 NRBF2P5-201ENST00000603087 788 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.35□□□□□ -1.07
HOXA2O43364 AL050343.2-201ENST00000607338 280 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 AP001506.1-201ENST00000615444 211 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 pRNA.9-201ENST00000618609 89 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 CRYM-AS1-204ENST00000637983 556 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HOXA2O43364 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
HOXA2O43364 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HOXA2O43364 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.35□□□□□ -1.07
HOXA2O43364 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXA2O43364 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HOXA2O43364 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
HOXA2O43364 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.35□□□□□ -1.07
HOXA2O43364 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXA2O43364 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXA2O43364 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
HOXA2O43364 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.35□□□□□ -1.07
HOXA2O43364 AL365475.1-201ENST00000565135 1949 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 AC092725.2-201ENST00000567658 1389 ntBASIC8.35□□□□□ -1.07
HOXA2O43364 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.35□□□□□ -1.07
HOXA2O43364 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 VEZF1P1-201ENST00000423931 1541 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HOXA2O43364 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 AC009090.4-201ENST00000623921 3691 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXA2O43364 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HOXA2O43364 RN7SKP208-201ENST00000365474 361 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AL672167.2-201ENST00000377164 879 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 RNU6-332P-201ENST00000391193 108 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 GAPDHP73-201ENST00000423411 1007 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 NIP7P1-201ENST00000433227 512 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
HOXA2O43364 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HOXA2O43364 AL590682.1-201ENST00000437248 344 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.34□□□□□ -1.07
HOXA2O43364 CHIAP1-201ENST00000456220 995 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.34□□□□□ -1.07
HOXA2O43364 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.34□□□□□ -1.07
HOXA2O43364 RN7SL516P-201ENST00000496127 297 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC8.34□□□□□ -1.07
HOXA2O43364 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.34□□□□□ -1.07
HOXA2O43364 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC8.34□□□□□ -1.07
HOXA2O43364 AC090835.1-201ENST00000515189 1024 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 OR5AN2P-201ENST00000534535 896 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 EGLN3P1-201ENST00000541727 720 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC8.34□□□□□ -1.07
HOXA2O43364 APEX1-214ENST00000557054 888 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXA2O43364 AL157394.1-201ENST00000562983 1224 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.34□□□□□ -1.07
HOXA2O43364 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.34□□□□□ -1.07
HOXA2O43364 AC068802.1-201ENST00000603420 732 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AL139286.1-201ENST00000604465 483 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AL360085.1-201ENST00000604713 532 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AC007363.1-201ENST00000604736 620 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AC027506.1-201ENST00000621395 198 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AC079684.1-201ENST00000621405 437 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXA2O43364 MIR1321-201ENST00000637766 79 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
HOXA2O43364 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms