Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC097721.1-201ENST00000427150 1253 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 RRM2P4-201ENST00000441721 562 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 RPL6P30-201ENST00000443382 862 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 RPL6P5-201ENST00000445678 828 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 COX4I1P2-201ENST00000447446 547 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC010476.1-201ENST00000519111 851 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 DPPA3P2-202ENST00000557188 1219 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC021851.1-201ENST00000608537 1082 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 AC078880.5-201ENST00000617845 421 ntBASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
PCDHB1Q9Y5F3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RPL11P4-201ENST00000332269 436 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RNFT1P3-201ENST00000340898 1052 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC007618.1-201ENST00000366455 732 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC003045.1-201ENST00000398779 713 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 GCNT1P4-201ENST00000404096 329 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AL355615.1-201ENST00000406187 641 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RNA5SP198-201ENST00000410376 127 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AL356968.2-201ENST00000412769 1257 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 CDY17P-201ENST00000414121 1282 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AL158827.1-201ENST00000416300 391 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 HYALP1-201ENST00000417674 1279 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RPL36P18-201ENST00000419316 318 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 MTCO2P23-201ENST00000425216 680 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 CDY8P-201ENST00000428380 1279 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 DNAJA1P5-201ENST00000440278 943 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 CDY20P-201ENST00000447528 1279 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 PPIAP20-201ENST00000449839 135 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 SNX18P26-201ENST00000458433 740 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RN7SL221P-201ENST00000466190 281 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC104164.3-201ENST00000467363 1258 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC094085.1-201ENST00000468914 584 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC020898.1-201ENST00000474167 787 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RPS17P11-201ENST00000474297 293 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC022206.1-201ENST00000495947 347 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 NPM1P27-201ENST00000502784 830 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC090666.1-201ENST00000578241 445 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 GLYATL1P2-202ENST00000588046 902 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC004805.3-201ENST00000603178 310 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 MIR6085-201ENST00000618314 110 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms