Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COPS3Q9UNS2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 SNORA21-201ENST00000362423 132 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 RN7SKP69-201ENST00000365390 305 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 RNU6-167P-201ENST00000384292 106 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 MIR551B-201ENST00000384984 96 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AL139805.1-201ENST00000407837 289 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 METTL15P3-201ENST00000415522 1221 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 RPL12P12-201ENST00000424633 501 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 VN1R20P-201ENST00000425215 966 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 SEPT14P12-201ENST00000442280 560 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AL356121.1-201ENST00000442911 156 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 VN1R96P-201ENST00000446052 858 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AC002553.3-201ENST00000453002 341 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 H3F3AP5-201ENST00000475267 429 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 RPL12P30-201ENST00000488389 499 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 CR383658.1-201ENST00000514609 734 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 MIR2117-201ENST00000516780 80 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 RN7SL66P-201ENST00000582099 264 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 AL080312.2-201ENST00000613001 630 ntBASIC5.24□□□□□ -1.57
COPS3Q9UNS2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPS3Q9UNS2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC093591.2-201ENST00000565254 3843 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC099677.3-201ENST00000427081 395 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 GAPDHP19-201ENST00000431768 1005 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC242426.1-201ENST00000435270 960 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC010240.2-201ENST00000445363 1205 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 FTLP8-201ENST00000446770 267 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 PDCL3P4-201ENST00000489621 720 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 COX6CP7-201ENST00000597056 208 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AL513327.3-201ENST00000602618 469 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC239868.2-201ENST00000564237 4527 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AC114774.1-201ENST00000507410 1770 ntBASIC5.23□□□□□ -1.57
COPS3Q9UNS2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms