Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL445528.2-201ENST00000620582 470 ntBASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 AC078883.4-201ENST00000623218 367 ntBASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 AP003497.2-201ENST00000624220 967 ntBASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 AC007603.3-201ENST00000636915 979 ntBASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 AC011455.2-201ENST00000599320 3336 ntBASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PACSIN3Q9UKS6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 RNA5SP478-201ENST00000364657 115 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 RNU6-152P-201ENST00000384037 107 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 MIR191-201ENST00000384873 92 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC019178.1-201ENST00000392337 440 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC026310.1-201ENST00000396004 378 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 SKINT1L-201ENST00000401057 817 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AL512504.1-201ENST00000415494 778 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC092570.3-201ENST00000420113 693 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 FAM183DP-201ENST00000421987 399 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AL445528.1-201ENST00000426330 420 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 ETF1P1-206ENST00000427296 984 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 MTCO1P51-201ENST00000427672 1060 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 MTCYBP21-201ENST00000443300 1113 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC069540.1-201ENST00000446320 988 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 RN7SL393P-201ENST00000463588 296 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AL355032.1-201ENST00000472981 438 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC116562.1-201ENST00000485355 781 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PRELID3BP7-201ENST00000503606 469 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 ATG10-AS1-201ENST00000504846 648 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC010468.3-201ENST00000508225 458 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 NACAP5-201ENST00000509863 636 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 NATP-201ENST00000523491 878 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 BTG1P1-201ENST00000540396 508 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC234775.3-201ENST00000564612 656 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 NPM1P45-201ENST00000583151 559 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC231759.1-201ENST00000616455 597 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AC061999.1-201ENST00000624454 177 ntBASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.1□□□□□ -1.43
PACSIN3Q9UKS6 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 MAPK10-287ENST00000641217 3037 ntBASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 GUCY1B2-204ENST00000531898 1979 ntBASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PACSIN3Q9UKS6 AC125238.2-201ENST00000430003 1440 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms