Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RN7SKP15-201ENST00000364742 309 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 MIR188-201ENST00000385034 86 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 ATP5HP3-201ENST00000396994 486 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 RPL7P58-201ENST00000402913 758 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 RPL5P19-201ENST00000404228 893 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 RNU4-64P-201ENST00000410795 131 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 OSTCP4-201ENST00000424397 449 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 VN1R42P-201ENST00000424651 344 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC003989.1-201ENST00000434569 565 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC011742.2-201ENST00000443818 352 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AL451063.1-201ENST00000450164 1133 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC022415.1-202ENST00000486612 523 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 RPL5P11-201ENST00000498068 893 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 CDH12P2-201ENST00000504393 298 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC083906.1-201ENST00000509298 406 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 RNU6-1308P-201ENST00000516817 103 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC084121.1-201ENST00000533882 835 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC005632.2-201ENST00000564271 828 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 OR1E3-201ENST00000575608 948 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 DHFRP1-201ENST00000579682 559 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 SMIM12P1-201ENST00000603004 274 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC112503.2-201ENST00000609005 552 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AL135999.3-201ENST00000610501 812 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC005393.1-201ENST00000617916 584 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC009120.7-201ENST00000623452 780 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AP001962.1-201ENST00000624114 559 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 MTND4P9-201ENST00000507819 1346 ntBASIC5.95□□□□□ -1.46
LRFN1Q9P244 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC005034.3-201ENST00000604845 1747 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRFN1Q9P244 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LRFN1Q9P244 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRFN1Q9P244 STAG3L4-201ENST00000352103 530 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 MIR16-2-201ENST00000362117 81 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 RNU1-46P-201ENST00000384425 164 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 YWHAZP6-201ENST00000399764 738 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 HMGB3P7-201ENST00000400214 611 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 RPL21P50-201ENST00000417698 477 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC108479.1-201ENST00000431142 427 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 GAPDHP59-201ENST00000435908 267 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 HSPE1P22-201ENST00000456856 327 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC107398.1-201ENST00000486904 505 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC063943.2-201ENST00000495697 534 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC022206.1-201ENST00000495947 347 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC025459.1-201ENST00000504072 156 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 SNX18P25-201ENST00000510539 758 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC108103.1-201ENST00000511286 446 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 314.4 ms