Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BLOC1S4Q9NUP1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.59□□□□□ -1.36
BLOC1S4Q9NUP1 CAP1P2-201ENST00000417455 1409 ntBASIC6.59□□□□□ -1.36
BLOC1S4Q9NUP1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
BLOC1S4Q9NUP1 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 MIR365B-201ENST00000362317 111 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC099535.1-201ENST00000408928 371 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC110602.1-201ENST00000437414 318 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 XKRYP6-201ENST00000440468 1116 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 XKRYP3-201ENST00000442113 1116 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 OSTCP1-201ENST00000455507 450 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC004129.2-201ENST00000457229 287 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 RN7SL168P-201ENST00000463821 279 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC093827.1-201ENST00000480094 861 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 snoU109.5-201ENST00000516231 132 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC078899.1-201ENST00000521432 1185 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC007346.2-201ENST00000564816 892 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC134669.1-201ENST00000581275 672 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC006115.2-201ENST00000596823 202 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 OR8G7P-201ENST00000616658 848 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 AP001052.1-201ENST00000626421 99 ntBASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BLOC1S4Q9NUP1 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 TMSB4XP2-201ENST00000335179 210 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RNU1-150P-201ENST00000362491 162 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RNA5SP477-201ENST00000362639 119 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RN7SKP128-201ENST00000364270 303 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RNA5SP500-201ENST00000364486 119 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 BX284632.2-201ENST00000421091 399 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ARAFP1-201ENST00000422172 605 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC069154.1-201ENST00000432914 542 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AL512605.1-202ENST00000441919 381 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AL359955.2-201ENST00000445380 353 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC239798.3-201ENST00000454459 408 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RPL31P53-201ENST00000457065 348 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 ATG10-AS1-201ENST00000504846 648 ntBASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.57□□□□□ -1.36
BLOC1S4Q9NUP1 RNU6-319P-201ENST00000516025 108 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms