Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AL161901.1-201ENST00000624954 3425 ntBASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC239868.2-201ENST00000564237 4527 ntBASIC6.11□□□□□ -1.43
CISHQ9NSE2 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AL158152.1-201ENST00000602652 1435 ntBASIC6.11□□□□□ -1.43
CISHQ9NSE2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 OR5W1P-201ENST00000423705 938 ntBASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 MEMO1P4-201ENST00000453590 386 ntBASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CISHQ9NSE2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CISHQ9NSE2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CISHQ9NSE2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CISHQ9NSE2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 SNORA64.1-201ENST00000362600 132 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 RNA5SP394-201ENST00000364216 119 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 HMGB1P20-201ENST00000402555 677 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 EEF1B2P8-201ENST00000414101 671 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 METTL15P3-201ENST00000415522 1221 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 VN1R3-201ENST00000418822 919 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC242426.1-201ENST00000435270 960 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC073109.1-201ENST00000445066 978 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 RPS7P6-201ENST00000485777 579 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 PSMA2P2-201ENST00000504319 686 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 SNORD46.2-201ENST00000516021 102 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 HMGB1P42-201ENST00000532126 553 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC090607.5-201ENST00000615692 224 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 MIR6861-201ENST00000618657 64 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AC087565.3-203ENST00000641018 837 ntBASIC6.1□□□□□ -1.43
CISHQ9NSE2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CISHQ9NSE2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CISHQ9NSE2 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CISHQ9NSE2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CISHQ9NSE2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CISHQ9NSE2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CISHQ9NSE2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CISHQ9NSE2 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 FUNDC2P3-201ENST00000334716 533 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 RNA5SP510-201ENST00000364697 99 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 NENFP1-201ENST00000419476 466 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 RNGTTP1-201ENST00000420965 728 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms