Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 AC104966.1-201ENST00000467010 1464 ntBASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RSPO3Q9BXY4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AL158152.1-201ENST00000602652 1435 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 RNA5SP232-201ENST00000364144 119 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 MIR130A-201ENST00000385274 89 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 RNA5SP431-201ENST00000410312 120 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 VN1R3-201ENST00000418822 919 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 BX323845.3-201ENST00000428215 527 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AC083899.1-201ENST00000454465 3819 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 RPSAP37-201ENST00000470913 821 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 RPS7P6-201ENST00000485777 579 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AC073610.1-201ENST00000489971 396 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AC139697.1-201ENST00000548429 745 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 HSPE1P2-201ENST00000554777 306 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 MIR4776-2-201ENST00000580204 80 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AL583832.1-201ENST00000603227 784 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 AP001437.1-201ENST00000608783 456 ntBASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RSPO3Q9BXY4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL159987.1-201ENST00000347911 293 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 RN7SKP185-201ENST00000362813 326 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL354868.1-201ENST00000417077 482 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 BX284632.2-201ENST00000421091 399 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 ATP5LP2-201ENST00000440646 311 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL512605.1-202ENST00000441919 381 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL359955.2-201ENST00000445380 353 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC073072.2-201ENST00000447425 348 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 PPIAP27-201ENST00000453800 265 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 Z83838.1-202ENST00000456225 839 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC092865.4-201ENST00000477936 615 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 RPS17P5-201ENST00000498293 408 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC084121.1-201ENST00000533882 835 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC006512.2-201ENST00000543250 486 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 RPA2P1-201ENST00000556557 721 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AL845552.1-201ENST00000556820 323 ntBASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms