Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC094085.1-201ENST00000468914 584 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC015864.1-201ENST00000496512 544 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AL390198.2-201ENST00000510553 222 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 DPRXP4-201ENST00000578053 568 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC063977.7-201ENST00000594454 337 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC111186.1-201ENST00000604684 130 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC114477.1-201ENST00000605097 605 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC010245.2-201ENST00000606908 1167 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC239868.4-201ENST00000608318 671 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 RN7SL261P-201ENST00000613441 282 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AL157770.1-201ENST00000623049 439 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AL034408.1-201ENST00000637712 664 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC095050.2-201ENST00000510748 1458 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 AC020658.2-201ENST00000559030 4020 ntBASIC7.68□□□□□ -1.18
SYNGAP1Q96PV0 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC027514.1-201ENST00000588561 1603 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC005839.1-201ENST00000624148 3213 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 LYPLA1P3-201ENST00000402650 695 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 FCF1P5-201ENST00000406490 482 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RAP1BP1-201ENST00000412709 553 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AF274854.1-201ENST00000413236 615 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 PTP4A1P5-201ENST00000420305 455 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 OR5BE1P-201ENST00000425977 939 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 MTCO1P43-201ENST00000431831 488 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AL929288.2-201ENST00000446368 407 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RPL23AP23-201ENST00000452590 471 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RPL26P30-201ENST00000453533 435 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RPL7AP23-201ENST00000482625 776 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RPS4XP14-201ENST00000493072 781 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 HMGN1P16-201ENST00000508308 283 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC106872.4-201ENST00000510050 523 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC110775.1-201ENST00000513721 462 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RN7SKP248-201ENST00000516278 305 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AP003461.1-201ENST00000528866 78 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 OR52K3P-201ENST00000531655 943 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC092868.3-201ENST00000560515 784 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC124283.4-201ENST00000581815 456 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC069366.1-201ENST00000583159 838 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC079880.2-201ENST00000603790 1213 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AL365181.4-201ENST00000609800 547 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC022079.2-201ENST00000619739 566 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 OR5BE1P-202ENST00000641168 1176 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 SAMMSON-214ENST00000641395 1264 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AL353743.3-201ENST00000442109 1468 ntBASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC015871.3-201ENST00000618835 2261 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms