Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 OR1E3-201ENST00000575608 948 ntBASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 MIR6889-201ENST00000613185 59 ntBASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 RBMY1HP-201ENST00000382759 1389 ntBASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4IP1Q8WWV3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 HSPD1P9-201ENST00000420325 1636 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL354893.1-201ENST00000433735 348 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC023141.3-201ENST00000436698 278 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL663074.2-201ENST00000440621 479 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC097463.1-201ENST00000447288 481 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC093166.3-201ENST00000448785 303 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC021006.1-201ENST00000489849 553 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL117692.1-201ENST00000494283 713 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 MIR2117-201ENST00000516780 80 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 RN7SKP183-201ENST00000517169 324 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 OR7E158P-201ENST00000524483 910 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC092332.1-201ENST00000563684 829 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 MIR4502-201ENST00000580432 81 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL353729.2-201ENST00000605859 1249 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL359091.2-201ENST00000609303 556 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 MIR6806-201ENST00000622141 64 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC016542.2-201ENST00000624201 619 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AL357562.1-201ENST00000624911 609 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC090220.1-201ENST00000593078 1699 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 AC009962.1-201ENST00000567327 3813 ntBASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4IP1Q8WWV3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTN4IP1Q8WWV3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms