Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNA5SP453-201ENST00000362503 119 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 PRELID1P1-201ENST00000403549 660 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AL133260.1-201ENST00000405720 405 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 PTCD2P2-201ENST00000415579 1095 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 RPL12P16-201ENST00000431098 498 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 Z85994.2-201ENST00000434327 452 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AL158053.1-201ENST00000441503 453 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 RPS15AP29-201ENST00000445539 400 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 RAB28P2-201ENST00000454299 641 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 MTND6P32-201ENST00000457611 483 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 OR51A1P-201ENST00000511110 946 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC138517.1-201ENST00000515724 568 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 SNORA74.1-201ENST00000516320 180 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AP003049.1-201ENST00000529418 457 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 LSM1P2-201ENST00000604911 322 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC008147.4-201ENST00000617570 1204 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 AC125336.1-201ENST00000508893 2827 ntBASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CLIP4Q8N3C7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 MTCO1P57-201ENST00000432182 261 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC013403.1-201ENST00000436954 263 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC074367.1-201ENST00000438685 1125 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL390879.1-201ENST00000439143 386 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC064862.5-201ENST00000440618 334 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 RPL12P49-201ENST00000441100 121 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL512593.1-201ENST00000444758 779 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 RN7SL352P-201ENST00000466002 277 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC093827.1-201ENST00000480094 861 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC104629.1-201ENST00000494226 508 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC095052.1-201ENST00000509955 863 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 MTND1P6-201ENST00000523621 946 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 DNAJC19P3-201ENST00000594491 331 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC011891.2-201ENST00000604949 397 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 BNIP3P19-201ENST00000605397 577 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC034229.4-201ENST00000607861 441 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AC084824.5-201ENST00000612009 413 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 MIR6823-201ENST00000622118 61 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL138693.1-201ENST00000622219 129 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms