Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC078886.1-201ENST00000549144 554 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC025449.1-201ENST00000603896 529 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC026468.1-201ENST00000614981 107 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RHOXF1P2-201ENST00000635431 502 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 MIR6863-201ENST00000636112 90 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC117529.2-201ENST00000512159 2068 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 MFSD8-218ENST00000641186 4448 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC017104.4-201ENST00000636283 1592 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 ZNF37BP-203ENST00000452306 1352 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL031651.1-201ENST00000615357 1438 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 IGKV7-3-201ENST00000357453 298 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 Y_RNA.25-201ENST00000362528 102 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 Y_RNA.38-201ENST00000362617 102 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 Y_RNA.296-201ENST00000364930 108 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 SNORA51.12-201ENST00000384448 134 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 RNU6-876P-201ENST00000391295 104 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL356583.2-201ENST00000426536 280 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 NPM1P22-201ENST00000427761 952 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 FAF2P1-201ENST00000429974 1298 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 BTF3P10-201ENST00000433415 495 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC073614.1-201ENST00000438690 650 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL365436.1-201ENST00000452587 495 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC091564.1-201ENST00000464563 479 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC019235.1-201ENST00000503847 207 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC021678.1-201ENST00000505195 936 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC027309.2-201ENST00000520566 192 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 OR5M7P-201ENST00000526140 972 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 MIR3913-1-201ENST00000577744 102 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms