Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 RN7SKP146-201ENST00000410242 334 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC079809.1-201ENST00000415468 276 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AL139158.1-201ENST00000424719 340 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC099782.1-201ENST00000425889 474 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 RPL12P18-201ENST00000437175 325 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 RPS7P3-201ENST00000443360 580 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 RSU1P1-201ENST00000453416 441 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 PPIAP7-201ENST00000454070 489 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 CEACAMP11-201ENST00000455211 583 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC106822.1-201ENST00000502647 526 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC110056.1-201ENST00000525759 911 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AP000620.1-201ENST00000527147 504 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 RN7SL230P-201ENST00000580835 303 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 MIR4660-201ENST00000583549 74 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC005828.7-201ENST00000607331 556 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AL021918.2-201ENST00000613415 194 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AL445670.1-201ENST00000618889 801 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 FAM27E2-201ENST00000619668 403 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 HSPA8P14-201ENST00000552265 1805 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AP001029.2-203ENST00000589795 4910 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC009962.1-201ENST00000567327 3813 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 GNL2P1-201ENST00000451274 2190 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 RNA5SP198-201ENST00000410376 127 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 METTL15P3-201ENST00000415522 1221 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 Z82198.3-201ENST00000421145 199 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC108479.1-201ENST00000431142 427 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC023141.3-201ENST00000436698 278 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC096632.2-201ENST00000438139 1239 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 RNU1-88P-201ENST00000459274 128 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 RN7SL197P-201ENST00000466981 299 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 MIR2117-201ENST00000516780 80 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 RNA5SP230-201ENST00000517039 122 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 ZNF322P1-201ENST00000568013 1209 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 GARSP1-201ENST00000570895 719 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AL133481.2-203ENST00000607558 139 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 AL357140.4-201ENST00000636827 412 ntBASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC50Q8IVM0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms