Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC131649.2-201ENST00000624925 4439 ntBASIC8.02□□□□□ -1.13
RNF135Q8IUD6 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF135Q8IUD6 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC016930.1-201ENST00000468766 2205 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 SNORA4.1-201ENST00000364263 144 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 Y_RNA.311-201ENST00000365068 96 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AL450124.1-201ENST00000376401 353 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AL672167.2-201ENST00000377164 879 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 RNU4-31P-201ENST00000384211 141 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AP000357.1-201ENST00000409926 1165 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 RNA5SP177-201ENST00000410122 107 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 RNU6-575P-201ENST00000411326 105 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 RPL7P44-201ENST00000424827 742 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 B3GNT2P1-201ENST00000434960 952 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AL512882.1-201ENST00000436086 832 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC097527.1-201ENST00000437031 530 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 RPL29P7-201ENST00000440227 457 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 GTF2F2P2-201ENST00000445825 721 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC019084.1-201ENST00000457337 432 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 OR9M1P-201ENST00000459641 921 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC117395.1-201ENST00000487390 403 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC117522.1-201ENST00000509821 380 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC087257.2-201ENST00000538759 928 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 MTCO3P13-201ENST00000577757 781 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 GLUD1P2-201ENST00000583339 201 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 GLUD1P8-201ENST00000585063 203 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC006967.3-201ENST00000594086 1093 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC015871.2-201ENST00000603605 948 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC112220.3-201ENST00000605502 502 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC055876.5-201ENST00000605667 259 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC012150.2-201ENST00000621300 544 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 ZNF887P-201ENST00000431363 1407 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.01□□□□□ -1.13
RNF135Q8IUD6 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF135Q8IUD6 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RNF135Q8IUD6 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF135Q8IUD6 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8□□□□□ -1.13
RNF135Q8IUD6 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF135Q8IUD6 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8□□□□□ -1.13
RNF135Q8IUD6 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
RNF135Q8IUD6 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8□□□□□ -1.13
RNF135Q8IUD6 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF135Q8IUD6 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8□□□□□ -1.13
RNF135Q8IUD6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8□□□□□ -1.13
RNF135Q8IUD6 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF135Q8IUD6 AC009948.3-201ENST00000603415 1798 ntBASIC8□□□□□ -1.13
RNF135Q8IUD6 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8□□□□□ -1.13
RNF135Q8IUD6 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms