Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL356317.1-201ENST00000396110 1436 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC099535.1-201ENST00000408928 371 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 RNU2-18P-201ENST00000411224 162 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL096829.1-201ENST00000413677 457 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC007064.3-201ENST00000422608 359 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC092865.3-201ENST00000425390 1026 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 ARAFP2-201ENST00000440565 559 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC010240.2-201ENST00000445363 1205 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC104629.2-201ENST00000468627 598 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC025470.1-201ENST00000510053 2032 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 TPM3P3-201ENST00000521343 354 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC021269.1-201ENST00000526860 705 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC244502.2-201ENST00000543361 851 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AP001267.4-201ENST00000602598 545 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL356608.1-201ENST00000610034 820 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL159169.2-201ENST00000610061 1269 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL357562.1-201ENST00000624911 609 ntBASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.44□□□□□ -1.54
NHLRC1Q6VVB1 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC010132.2-201ENST00000295493 1043 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 RN7SKP171-201ENST00000364417 303 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AL096711.1-201ENST00000404780 554 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 RNU6-564P-201ENST00000410983 104 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AL731534.1-201ENST00000434711 269 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 HMGB3P10-201ENST00000434734 572 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 OR3D1P-201ENST00000438288 955 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 BUD31P2-201ENST00000449374 300 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AL445687.2-201ENST00000458156 728 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC105918.1-201ENST00000474399 838 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 OR9N1P-201ENST00000491296 333 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AL117692.1-201ENST00000494283 713 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC092349.1-201ENST00000504903 310 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC018797.1-201ENST00000510791 255 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 CR383658.1-201ENST00000514609 734 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC138207.8-204ENST00000579588 527 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC008833.1-201ENST00000611633 691 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 MIR6889-201ENST00000613185 59 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC073488.6-201ENST00000632293 754 ntBASIC5.43□□□□□ -1.54
NHLRC1Q6VVB1 AC000095.2-202ENST00000637415 154 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms