Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 AC012618.3-205ENST00000637896 1496 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AP003119.3-201ENST00000566747 4192 ntBASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 HNRNPA3P4-201ENST00000427514 803 ntBASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AL035690.1-201ENST00000490892 383 ntBASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 AC011497.2-201ENST00000600255 639 ntBASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 MIR7641-1-201ENST00000627518 61 ntBASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 CYP4F35P-202ENST00000636121 390 ntBASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
SNAPC4Q5SXM2 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC119674.1-213ENST00000641177 1386 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC010132.2-201ENST00000295493 1043 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC126755.2-208ENST00000327792 462 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC138969.1-213ENST00000331436 462 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC093162.1-201ENST00000419682 124 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC008897.1-201ENST00000494006 347 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC209154.1-201ENST00000582156 337 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 WBP1LP8-201ENST00000617401 327 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 AC130304.1-201ENST00000622942 2385 ntBASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNAPC4Q5SXM2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AL391262.1-201ENST00000556558 1992 ntBASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 FAM96AP1-201ENST00000430879 482 ntBASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 NDUFAF4P3-201ENST00000456468 525 ntBASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AL603882.1-201ENST00000463059 681 ntBASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AC087283.1-201ENST00000604029 1074 ntBASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 CASC22-202ENST00000628396 802 ntTSL 5 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 AC092724.1-201ENST00000624623 3397 ntBASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.24□□□□□ -0.93
SNAPC4Q5SXM2 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 AC068138.1-201ENST00000412635 217 ntBASIC9.23□□□□□ -0.93
SNAPC4Q5SXM2 AC092905.1-201ENST00000467527 949 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms