Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 SNX18P9-201ENST00000440580 835 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 AC073465.2-201ENST00000440938 498 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 AL512593.1-201ENST00000444758 779 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 AC004692.1-201ENST00000455430 424 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 RN7SKP198-201ENST00000459286 306 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 AC104849.1-201ENST00000462623 405 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 RN7SL282P-201ENST00000479676 297 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 SNX18P24-201ENST00000505249 671 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.9□□□□□ -1.46
GABPB1Q06547 MIR2117-201ENST00000516780 80 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 RN7SKP5-201ENST00000517045 272 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.9□□□□□ -1.46
GABPB1Q06547 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.9□□□□□ -1.46
GABPB1Q06547 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.9□□□□□ -1.46
GABPB1Q06547 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.9□□□□□ -1.46
GABPB1Q06547 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC5.9□□□□□ -1.46
GABPB1Q06547 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.9□□□□□ -1.46
GABPB1Q06547 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.9□□□□□ -1.46
GABPB1Q06547 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.9□□□□□ -1.46
GABPB1Q06547 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.9□□□□□ -1.46
GABPB1Q06547 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.9□□□□□ -1.46
GABPB1Q06547 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.9□□□□□ -1.46
GABPB1Q06547 AL035661.1-201ENST00000620459 1144 ntBASIC5.9□□□□□ -1.46
GABPB1Q06547 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
GABPB1Q06547 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GABPB1Q06547 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
GABPB1Q06547 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
GABPB1Q06547 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
GABPB1Q06547 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
GABPB1Q06547 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
GABPB1Q06547 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GABPB1Q06547 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
GABPB1Q06547 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 LYARP1-201ENST00000436977 1501 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPB1Q06547 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
GABPB1Q06547 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GABPB1Q06547 RNA5SP375-201ENST00000362975 119 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 SNORA30B-201ENST00000365319 129 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 OR1L6-202ENST00000373684 1044 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.89□□□□□ -1.47
GABPB1Q06547 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 MIR301B-201ENST00000390813 78 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 AC226101.1-201ENST00000401483 387 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC023141.1-201ENST00000419418 379 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.89□□□□□ -1.47
GABPB1Q06547 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPB1Q06547 ST13P2-201ENST00000438916 1109 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 CYCSP24-201ENST00000445119 316 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 AL031584.1-201ENST00000447169 754 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 RPSAP48-201ENST00000466509 889 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 RN7SL390P-201ENST00000470634 284 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPB1Q06547 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPB1Q06547 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPB1Q06547 AC073046.2-201ENST00000604756 527 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 AC018558.4-201ENST00000622153 281 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
GABPB1Q06547 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 FBXL21-201ENST00000297158 1305 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GABPB1Q06547 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPB1Q06547 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.89□□□□□ -1.47
GABPB1Q06547 OR4F13P-202ENST00000560066 2054 ntBASIC5.89□□□□□ -1.47
GABPB1Q06547 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPB1Q06547 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
GABPB1Q06547 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPB1Q06547 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPB1Q06547 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPB1Q06547 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.88□□□□□ -1.47
GABPB1Q06547 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPB1Q06547 RN7SKP1-201ENST00000365525 307 ntBASIC5.88□□□□□ -1.47
GABPB1Q06547 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPB1Q06547 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
GABPB1Q06547 AC007068.1-201ENST00000396690 844 ntBASIC5.88□□□□□ -1.47
GABPB1Q06547 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GABPB1Q06547 PPIL1P1-201ENST00000423936 499 ntBASIC5.88□□□□□ -1.47
GABPB1Q06547 AC104843.2-201ENST00000427666 297 ntBASIC5.88□□□□□ -1.47
GABPB1Q06547 AL354893.1-201ENST00000433735 348 ntBASIC5.88□□□□□ -1.47
GABPB1Q06547 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.88□□□□□ -1.47
GABPB1Q06547 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.88□□□□□ -1.47
GABPB1Q06547 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.88□□□□□ -1.47
GABPB1Q06547 AC016772.1-201ENST00000444170 1261 ntBASIC5.88□□□□□ -1.47
GABPB1Q06547 POU5F1P5-201ENST00000445059 658 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms