Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 HIRAP1-201ENST00000605318 787 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AL352984.2-201ENST00000611153 546 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC114774.1-201ENST00000507410 1770 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 MTND5P12-201ENST00000502851 1449 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 AF287957.1-201ENST00000607368 1595 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC016739.1-201ENST00000405359 345 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 RN7SKP279-201ENST00000411383 298 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 AL354868.1-201ENST00000417077 482 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 LDHAP1-201ENST00000509421 992 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 RNA5SP340-201ENST00000517132 107 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 TOMM20P1-201ENST00000534518 427 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 ZNF322P1-201ENST00000568013 1209 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 MIR4776-2-201ENST00000580204 80 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC134669.1-201ENST00000581275 672 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC008507.3-201ENST00000585753 472 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC108673.3-201ENST00000609183 335 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 AC079776.5-201ENST00000641920 211 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 LYARP1-201ENST00000436977 1501 ntBASIC5.56□□□□□ -1.52
HMGCS1Q01581 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
HMGCS1Q01581 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS1Q01581 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC140479.2-201ENST00000421567 3130 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 SAMMSON-210ENST00000641260 1308 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL449283.1-201ENST00000602631 3403 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 RNA5SP433-201ENST00000364491 114 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 MIR621-201ENST00000384919 96 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 RPL7P58-201ENST00000402913 758 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 RN7SKP29-201ENST00000410957 272 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 GAPDHP48-201ENST00000436626 961 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 PPIAP27-201ENST00000453800 265 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 CST12P-201ENST00000457644 362 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 AC023194.2-201ENST00000465398 406 ntBASIC5.55□□□□□ -1.52
HMGCS1Q01581 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCS1Q01581 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGCS1Q01581 RPA2P1-201ENST00000556557 721 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms