Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HIST1H3AP68431 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HIST1H3AP68431 AF287957.1-201ENST00000607368 1595 ntBASIC5.12□□□□□ -1.59
HIST1H3AP68431 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HIST1H3AP68431 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HIST1H3AP68431 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HIST1H3AP68431 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.12□□□□□ -1.59
HIST1H3AP68431 BCORP1-203ENST00000513194 5093 ntBASIC5.12□□□□□ -1.59
HIST1H3AP68431 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC027088.4-201ENST00000611559 1947 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 CASC19-260ENST00000641828 2001 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 COX6B1P3-201ENST00000312310 260 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 U3.10-201ENST00000364459 214 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 RNA5SP431-201ENST00000410312 120 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 RN7SKP17-201ENST00000411242 351 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL354890.1-201ENST00000413730 346 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 METTL15P3-201ENST00000415522 1221 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL354868.1-201ENST00000417077 482 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 BX284632.2-201ENST00000421091 399 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 CLNS1AP1-201ENST00000435954 682 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 ATP5LP2-201ENST00000440646 311 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL512605.1-202ENST00000441919 381 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC023141.8-201ENST00000442554 208 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 RPL5P10-201ENST00000445207 894 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL359955.2-201ENST00000445380 353 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC104339.1-201ENST00000465478 348 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 RN7SL193P-201ENST00000491708 276 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 RNA5SP340-201ENST00000517132 107 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC006512.2-201ENST00000543250 486 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 RNA5SP439-201ENST00000617595 124 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC048341.3-201ENST00000619323 491 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL596275.2-207ENST00000641188 675 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 AL442128.2-201ENST00000620246 1824 ntBASIC5.11□□□□□ -1.59
HIST1H3AP68431 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HIST1H3AP68431 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HIST1H3AP68431 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AL355488.2-201ENST00000609909 2850 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AL355834.1-201ENST00000556602 3965 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HIST1H3AP68431 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HIST1H3AP68431 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HIST1H3AP68431 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 RPL11P3-201ENST00000395256 523 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC019205.1-201ENST00000421830 730 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC118758.1-202ENST00000454719 225 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 RPL12P39-201ENST00000455456 496 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 CST12P-201ENST00000457644 362 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms