Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL161756.3-201ENST00000641216 2071 ntBASIC5.9□□□□□ -1.47
AP1S1P61966 FBXL21-201ENST00000297158 1305 ntBASIC5.9□□□□□ -1.47
AP1S1P61966 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
AP1S1P61966 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.9□□□□□ -1.47
AP1S1P61966 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.9□□□□□ -1.47
AP1S1P61966 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
AP1S1P61966 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.9□□□□□ -1.47
AP1S1P61966 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.9□□□□□ -1.47
AP1S1P61966 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
AP1S1P61966 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
AP1S1P61966 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 AL034546.1-201ENST00000623740 3693 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
AP1S1P61966 OR52B3P-201ENST00000314715 928 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 LYPLA1P3-201ENST00000402650 695 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
AP1S1P61966 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.89□□□□□ -1.47
AP1S1P61966 MRPL53P1-201ENST00000414323 319 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 RPS3P2-201ENST00000421346 701 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 AC079807.1-201ENST00000429993 481 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.89□□□□□ -1.47
AP1S1P61966 GAPDHP34-201ENST00000432112 823 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.89□□□□□ -1.47
AP1S1P61966 RPS17P15-201ENST00000475609 349 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 NENFP3-201ENST00000503735 313 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.89□□□□□ -1.47
AP1S1P61966 SNORA70.20-201ENST00000516848 126 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.89□□□□□ -1.47
AP1S1P61966 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.89□□□□□ -1.47
AP1S1P61966 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.89□□□□□ -1.47
AP1S1P61966 AC023389.2-201ENST00000580031 955 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 AC100767.2-201ENST00000604840 693 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 RPL12P48-201ENST00000605620 304 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
AP1S1P61966 NEPNP-201ENST00000404786 1371 ntBASIC5.89□□□□□ -1.47
AP1S1P61966 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.89□□□□□ -1.47
AP1S1P61966 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
AP1S1P61966 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP1S1P61966 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.89□□□□□ -1.47
AP1S1P61966 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.89□□□□□ -1.47
AP1S1P61966 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
AP1S1P61966 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.88□□□□□ -1.47
AP1S1P61966 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.88□□□□□ -1.47
AP1S1P61966 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.88□□□□□ -1.47
AP1S1P61966 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
AP1S1P61966 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
AP1S1P61966 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
AP1S1P61966 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
AP1S1P61966 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 AC245060.4-201ENST00000413293 1121 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.88□□□□□ -1.47
AP1S1P61966 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.88□□□□□ -1.47
AP1S1P61966 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.88□□□□□ -1.47
AP1S1P61966 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 AC144530.1-201ENST00000452862 555 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 AC004129.2-201ENST00000457229 287 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 AC006539.1-201ENST00000481419 501 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 AC090568.1-201ENST00000509499 856 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.88□□□□□ -1.47
AP1S1P61966 RN7SKP67-201ENST00000515905 235 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.88□□□□□ -1.47
AP1S1P61966 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.88□□□□□ -1.47
AP1S1P61966 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.88□□□□□ -1.47
AP1S1P61966 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
AP1S1P61966 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.88□□□□□ -1.47
AP1S1P61966 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.88□□□□□ -1.47
AP1S1P61966 AC117409.1-201ENST00000470499 1310 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.88□□□□□ -1.47
AP1S1P61966 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
AP1S1P61966 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP1S1P61966 AC090220.1-201ENST00000593078 1699 ntBASIC5.88□□□□□ -1.47
AP1S1P61966 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.88□□□□□ -1.47
AP1S1P61966 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
AP1S1P61966 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
AP1S1P61966 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.87□□□□□ -1.47
AP1S1P61966 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.87□□□□□ -1.47
AP1S1P61966 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.87□□□□□ -1.47
AP1S1P61966 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
AP1S1P61966 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
AP1S1P61966 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
AP1S1P61966 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms