Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.51□□□□□ -1.53
LIM2P55344 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.51□□□□□ -1.53
LIM2P55344 EIF5AP4-201ENST00000441206 465 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 AC015983.1-201ENST00000441577 373 ntBASIC5.51□□□□□ -1.53
LIM2P55344 CDY20P-201ENST00000447528 1279 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 AC004129.2-201ENST00000457229 287 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AC006539.1-201ENST00000481419 501 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.51□□□□□ -1.53
LIM2P55344 AC006499.4-201ENST00000510947 694 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.51□□□□□ -1.53
LIM2P55344 AL121594.2-201ENST00000541658 472 ntBASIC5.51□□□□□ -1.53
LIM2P55344 NANOGNBP2-201ENST00000544753 553 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 AC092121.1-201ENST00000569452 202 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
LIM2P55344 AC025857.2-201ENST00000602711 238 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AC009237.12-201ENST00000604755 742 ntBASIC5.51□□□□□ -1.53
LIM2P55344 AC069542.2-201ENST00000624816 216 ntBASIC5.51□□□□□ -1.53
LIM2P55344 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.51□□□□□ -1.53
LIM2P55344 AC009950.2-201ENST00000636548 183 ntBASIC5.51□□□□□ -1.53
LIM2P55344 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
LIM2P55344 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.51□□□□□ -1.53
LIM2P55344 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LIM2P55344 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIM2P55344 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 AC025470.1-201ENST00000510053 2032 ntBASIC5.5□□□□□ -1.53
LIM2P55344 AP004607.3-201ENST00000530354 3915 ntBASIC5.5□□□□□ -1.53
LIM2P55344 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 RN7SKP78-201ENST00000364711 318 ntBASIC5.5□□□□□ -1.53
LIM2P55344 OOSP1-201ENST00000398992 1270 ntBASIC5.5□□□□□ -1.53
LIM2P55344 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LIM2P55344 SUMO2P8-201ENST00000434672 286 ntBASIC5.5□□□□□ -1.53
LIM2P55344 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.5□□□□□ -1.53
LIM2P55344 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.5□□□□□ -1.53
LIM2P55344 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 RSU1P1-201ENST00000453416 441 ntBASIC5.5□□□□□ -1.53
LIM2P55344 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.5□□□□□ -1.53
LIM2P55344 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.5□□□□□ -1.53
LIM2P55344 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.5□□□□□ -1.53
LIM2P55344 RNA5SP271-201ENST00000516700 88 ntBASIC5.5□□□□□ -1.53
LIM2P55344 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.5□□□□□ -1.53
LIM2P55344 AC136777.2-201ENST00000522979 358 ntBASIC5.5□□□□□ -1.53
LIM2P55344 IGLV3-30-201ENST00000524362 298 ntBASIC5.5□□□□□ -1.53
LIM2P55344 HMGN2P36-201ENST00000529541 409 ntBASIC5.5□□□□□ -1.53
LIM2P55344 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.5□□□□□ -1.53
LIM2P55344 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.5□□□□□ -1.53
LIM2P55344 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.5□□□□□ -1.53
LIM2P55344 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.5□□□□□ -1.53
LIM2P55344 COX6CP7-201ENST00000597056 208 ntBASIC5.5□□□□□ -1.53
LIM2P55344 AL365181.4-201ENST00000609800 547 ntBASIC5.5□□□□□ -1.53
LIM2P55344 AL096712.1-201ENST00000614561 159 ntBASIC5.5□□□□□ -1.53
LIM2P55344 AL359742.1-201ENST00000622497 540 ntBASIC5.5□□□□□ -1.53
LIM2P55344 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.5□□□□□ -1.53
LIM2P55344 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LIM2P55344 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LIM2P55344 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
LIM2P55344 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.5□□□□□ -1.53
LIM2P55344 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIM2P55344 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.49□□□□□ -1.53
LIM2P55344 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
LIM2P55344 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.49□□□□□ -1.53
LIM2P55344 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.49□□□□□ -1.53
LIM2P55344 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.49□□□□□ -1.53
LIM2P55344 WDR95P-201ENST00000425638 1542 ntBASIC5.49□□□□□ -1.53
LIM2P55344 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIM2P55344 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.49□□□□□ -1.53
LIM2P55344 MFSD8-239ENST00000641590 2479 ntBASIC5.49□□□□□ -1.53
LIM2P55344 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIM2P55344 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
LIM2P55344 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIM2P55344 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIM2P55344 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms