Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CDH13P55290 RN7SKP128-201ENST00000364270 303 ntBASIC5.79□□□□□ -1.48
CDH13P55290 RNA5SP211-201ENST00000365516 117 ntBASIC5.79□□□□□ -1.48
CDH13P55290 RN7SKP17-201ENST00000411242 351 ntBASIC5.79□□□□□ -1.48
CDH13P55290 RPL7AP51-201ENST00000422016 760 ntBASIC5.79□□□□□ -1.48
CDH13P55290 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH13P55290 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH13P55290 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH13P55290 NDUFA5P8-201ENST00000449019 346 ntBASIC5.79□□□□□ -1.48
CDH13P55290 RSU1P1-201ENST00000453416 441 ntBASIC5.79□□□□□ -1.48
CDH13P55290 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 PFN1P6-201ENST00000476786 399 ntBASIC5.79□□□□□ -1.48
CDH13P55290 SNRPCP11-201ENST00000492453 205 ntBASIC5.79□□□□□ -1.48
CDH13P55290 GOLGA5P1-201ENST00000507317 980 ntBASIC5.79□□□□□ -1.48
CDH13P55290 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH13P55290 AC090424.1-201ENST00000535243 736 ntBASIC5.79□□□□□ -1.48
CDH13P55290 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH13P55290 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH13P55290 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH13P55290 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH13P55290 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH13P55290 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
CDH13P55290 AC073333.2-201ENST00000603589 769 ntBASIC5.79□□□□□ -1.48
CDH13P55290 AC012467.1-201ENST00000607740 256 ntBASIC5.79□□□□□ -1.48
CDH13P55290 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.79□□□□□ -1.48
CDH13P55290 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.79□□□□□ -1.48
CDH13P55290 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 RBMY1HP-201ENST00000382759 1389 ntBASIC5.79□□□□□ -1.48
CDH13P55290 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH13P55290 AC112255.1-201ENST00000624070 2493 ntBASIC5.79□□□□□ -1.48
CDH13P55290 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH13P55290 AC116158.1-201ENST00000560231 2129 ntBASIC5.78□□□□□ -1.48
CDH13P55290 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 AC140479.2-201ENST00000421567 3130 ntBASIC5.78□□□□□ -1.48
CDH13P55290 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 RNU6-386P-201ENST00000362650 107 ntBASIC5.78□□□□□ -1.48
CDH13P55290 RNU6-697P-201ENST00000363348 107 ntBASIC5.78□□□□□ -1.48
CDH13P55290 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
CDH13P55290 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH13P55290 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH13P55290 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH13P55290 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH13P55290 RNA5SP198-201ENST00000410376 127 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AL035422.1-201ENST00000414193 397 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH13P55290 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 AJ239321.1-201ENST00000424255 564 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC099677.3-201ENST00000427081 395 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC023141.3-201ENST00000436698 278 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC096632.2-201ENST00000438139 1239 ntBASIC5.78□□□□□ -1.48
CDH13P55290 RPS12P17-201ENST00000438591 377 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC010240.2-201ENST00000445363 1205 ntBASIC5.78□□□□□ -1.48
CDH13P55290 OR7E22P-201ENST00000478335 1035 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC079080.1-201ENST00000479841 822 ntBASIC5.78□□□□□ -1.48
CDH13P55290 CR383656.1-201ENST00000484916 377 ntBASIC5.78□□□□□ -1.48
CDH13P55290 ATG10-AS1-201ENST00000504846 648 ntBASIC5.78□□□□□ -1.48
CDH13P55290 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 MIR2117-201ENST00000516780 80 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC116917.1-201ENST00000520558 305 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH13P55290 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH13P55290 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH13P55290 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH13P55290 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH13P55290 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH13P55290 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH13P55290 AC025857.2-201ENST00000602711 238 ntBASIC5.78□□□□□ -1.48
CDH13P55290 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC104820.1-201ENST00000624183 307 ntBASIC5.78□□□□□ -1.48
CDH13P55290 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.78□□□□□ -1.48
CDH13P55290 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH13P55290 AC099654.15-201ENST00000639802 509 ntBASIC5.78□□□□□ -1.48
CDH13P55290 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CDH13P55290 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH13P55290 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH13P55290 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH13P55290 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CDH13P55290 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms