Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL445493.3-201ENST00000619568 477 ntBASIC5.63□□□□□ -1.51
CDH12P55289 MIR6811-201ENST00000620409 58 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC010872.1-201ENST00000624225 675 ntBASIC5.63□□□□□ -1.51
CDH12P55289 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 MTND4P9-201ENST00000507819 1346 ntBASIC5.63□□□□□ -1.51
CDH12P55289 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 AL137141.1-201ENST00000624622 4836 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC087516.1-201ENST00000561236 2428 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC016583.1-201ENST00000624221 2431 ntBASIC5.63□□□□□ -1.51
CDH12P55289 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH12P55289 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH12P55289 RPL11P4-201ENST00000332269 436 ntBASIC5.62□□□□□ -1.51
CDH12P55289 MIR421-201ENST00000365696 85 ntBASIC5.62□□□□□ -1.51
CDH12P55289 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH12P55289 MIR620-201ENST00000385232 95 ntBASIC5.62□□□□□ -1.51
CDH12P55289 PTCD2P2-201ENST00000415579 1095 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 NPM1P26-201ENST00000426339 738 ntBASIC5.62□□□□□ -1.51
CDH12P55289 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 AC094019.1-201ENST00000434678 472 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 RPL23AP60-201ENST00000450011 454 ntBASIC5.62□□□□□ -1.51
CDH12P55289 HIGD1AP16-201ENST00000450986 258 ntBASIC5.62□□□□□ -1.51
CDH12P55289 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 LDHBP2-201ENST00000456969 1005 ntBASIC5.62□□□□□ -1.51
CDH12P55289 RBMY2HP-201ENST00000457961 720 ntBASIC5.62□□□□□ -1.51
CDH12P55289 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 TOMM22P4-201ENST00000511318 336 ntBASIC5.62□□□□□ -1.51
CDH12P55289 MTATP6P9-201ENST00000515039 680 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 CASP1P2-201ENST00000526830 1258 ntBASIC5.62□□□□□ -1.51
CDH12P55289 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 AP001357.1-201ENST00000586304 1053 ntBASIC5.62□□□□□ -1.51
CDH12P55289 ABI1P1-201ENST00000603375 1120 ntBASIC5.62□□□□□ -1.51
CDH12P55289 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AC141002.1-201ENST00000607025 279 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AC139792.1-201ENST00000607051 647 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AC120053.1-201ENST00000607706 736 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AC016957.2-201ENST00000616998 848 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 AC089999.3-201ENST00000622440 577 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AL049777.1-201ENST00000622740 518 ntBASIC5.62□□□□□ -1.51
CDH12P55289 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH12P55289 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH12P55289 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
CDH12P55289 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH12P55289 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 AC024651.2-201ENST00000562480 2098 ntBASIC5.62□□□□□ -1.51
CDH12P55289 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH12P55289 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CDH12P55289 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH12P55289 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms