Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RPS29P14-201ENST00000431518 171 ntBASIC6□□□□□ -1.45
CDH4P55283 RPL23AP19-201ENST00000436229 369 ntBASIC6□□□□□ -1.45
CDH4P55283 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDH4P55283 AL445665.1-202ENST00000452436 324 ntBASIC6□□□□□ -1.45
CDH4P55283 PSMA2P2-201ENST00000504319 686 ntBASIC6□□□□□ -1.45
CDH4P55283 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6□□□□□ -1.45
CDH4P55283 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6□□□□□ -1.45
CDH4P55283 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6□□□□□ -1.45
CDH4P55283 SNORD46.2-201ENST00000516021 102 ntBASIC6□□□□□ -1.45
CDH4P55283 SNORA70.20-201ENST00000516848 126 ntBASIC6□□□□□ -1.45
CDH4P55283 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6□□□□□ -1.45
CDH4P55283 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6□□□□□ -1.45
CDH4P55283 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDH4P55283 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6□□□□□ -1.45
CDH4P55283 AC083837.1-201ENST00000565297 2994 ntBASIC6□□□□□ -1.45
CDH4P55283 MIR4260-201ENST00000583107 67 ntBASIC6□□□□□ -1.45
CDH4P55283 AC005224.3-201ENST00000584683 2140 ntBASIC6□□□□□ -1.45
CDH4P55283 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6□□□□□ -1.45
CDH4P55283 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6□□□□□ -1.45
CDH4P55283 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6□□□□□ -1.45
CDH4P55283 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6□□□□□ -1.45
CDH4P55283 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6□□□□□ -1.45
CDH4P55283 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6□□□□□ -1.45
CDH4P55283 AC006600.2-201ENST00000624834 2506 ntBASIC6□□□□□ -1.45
CDH4P55283 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH4P55283 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH4P55283 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CDH4P55283 AC106872.5-201ENST00000508856 1416 ntBASIC5.99□□□□□ -1.45
CDH4P55283 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 AC034229.2-201ENST00000566945 2508 ntBASIC5.99□□□□□ -1.45
CDH4P55283 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH4P55283 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH4P55283 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH4P55283 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH4P55283 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 AL078595.2-201ENST00000605309 1780 ntBASIC5.99□□□□□ -1.45
CDH4P55283 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDH4P55283 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 MIR375-201ENST00000362103 64 ntBASIC5.99□□□□□ -1.45
CDH4P55283 RNA5SP510-201ENST00000364697 99 ntBASIC5.99□□□□□ -1.45
CDH4P55283 RNU1-59P-201ENST00000364829 162 ntBASIC5.99□□□□□ -1.45
CDH4P55283 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CDH4P55283 SNORA11.3-201ENST00000408471 128 ntBASIC5.99□□□□□ -1.45
CDH4P55283 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH4P55283 RPL23AP18-201ENST00000416139 468 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AC096775.1-201ENST00000437724 448 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AC073109.1-201ENST00000445066 978 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH4P55283 REG1CP-206ENST00000447469 496 ntBASIC5.99□□□□□ -1.45
CDH4P55283 OSTCP1-201ENST00000455507 450 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AC007998.1-201ENST00000474156 672 ntBASIC5.99□□□□□ -1.45
CDH4P55283 RPS17P15-201ENST00000475609 349 ntBASIC5.99□□□□□ -1.45
CDH4P55283 NENFP3-201ENST00000503735 313 ntBASIC5.99□□□□□ -1.45
CDH4P55283 TOMM22P4-201ENST00000511318 336 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AC022826.1-201ENST00000519383 805 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AC090424.1-201ENST00000535243 736 ntBASIC5.99□□□□□ -1.45
CDH4P55283 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH4P55283 HMGN2P47-201ENST00000559378 272 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH4P55283 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH4P55283 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH4P55283 AC023389.2-201ENST00000580031 955 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH4P55283 AC006115.2-201ENST00000596823 202 ntBASIC5.99□□□□□ -1.45
CDH4P55283 AC125494.2-201ENST00000602431 657 ntBASIC5.99□□□□□ -1.45
CDH4P55283 U1.25-201ENST00000614085 162 ntBASIC5.99□□□□□ -1.45
CDH4P55283 U1.34-201ENST00000618578 162 ntBASIC5.99□□□□□ -1.45
CDH4P55283 SNORA11.6-201ENST00000619030 128 ntBASIC5.99□□□□□ -1.45
CDH4P55283 U1.31-201ENST00000620022 160 ntBASIC5.99□□□□□ -1.45
CDH4P55283 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH4P55283 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CDH4P55283 AL662795.2-201ENST00000624252 3706 ntBASIC5.99□□□□□ -1.45
CDH4P55283 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH4P55283 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CDH4P55283 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH4P55283 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CDH4P55283 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH4P55283 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDH4P55283 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CDH4P55283 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH4P55283 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CDH4P55283 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH4P55283 RNA5SP284-201ENST00000384547 118 ntBASIC5.98□□□□□ -1.45
CDH4P55283 AC019205.1-201ENST00000421830 730 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms