Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 GAPDHP24-201ENST00000328713 983 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 OR11H13P-201ENST00000359695 979 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 SNORA70-201ENST00000384436 135 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 OR7E101P-201ENST00000400428 513 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 AL121835.1-201ENST00000404250 354 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 Y_RNA.625-201ENST00000411256 107 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.12□□□□□ -1.43
LIMK1P53667 AC245884.2-201ENST00000426257 404 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 SUMO2P3-201ENST00000438311 288 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.12□□□□□ -1.43
LIMK1P53667 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 OR7L1P-201ENST00000456181 380 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 AL122020.1-201ENST00000472287 459 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 NDUFB5P1-201ENST00000508134 564 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.12□□□□□ -1.43
LIMK1P53667 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 AP001496.3-201ENST00000580230 913 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 BUB1P1-201ENST00000603541 607 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 AC025171.4-201ENST00000607250 1047 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 AL451049.1-201ENST00000608672 497 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 TCL6_3.1-201ENST00000619064 137 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 AC012254.5-201ENST00000623573 478 ntBASIC6.12□□□□□ -1.43
LIMK1P53667 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
LIMK1P53667 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LIMK1P53667 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 IMMTP1-201ENST00000435590 2219 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.11□□□□□ -1.43
LIMK1P53667 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.11□□□□□ -1.43
LIMK1P53667 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.11□□□□□ -1.43
LIMK1P53667 RBMY1HP-201ENST00000382759 1389 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AC117409.1-201ENST00000470499 1310 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 MIR375-201ENST00000362103 64 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AL589994.1-201ENST00000404962 340 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.11□□□□□ -1.43
LIMK1P53667 Z68868.1-201ENST00000429048 544 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 DEFA9P-201ENST00000433042 285 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 ARAFP2-201ENST00000440565 559 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 SNRPFP2-201ENST00000440710 251 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 SEPT14P12-201ENST00000442280 560 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
LIMK1P53667 AL157385.1-201ENST00000446973 268 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.11□□□□□ -1.43
LIMK1P53667 FCF1P7-201ENST00000451185 558 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 RN7SL165P-201ENST00000477476 291 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.11□□□□□ -1.43
LIMK1P53667 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
LIMK1P53667 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.11□□□□□ -1.43
LIMK1P53667 OR4A6P-201ENST00000534364 970 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 TRAV11-201ENST00000539512 339 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 AL953862.2-201ENST00000603089 820 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AC116651.1-201ENST00000609724 556 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 MIR6809-201ENST00000612189 116 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AL445649.1-201ENST00000615941 691 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AC096708.4-201ENST00000620563 552 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 AL136228.1-201ENST00000622221 319 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.11□□□□□ -1.43
LIMK1P53667 OR8G3P-202ENST00000641572 1255 ntBASIC6.11□□□□□ -1.43
LIMK1P53667 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMK1P53667 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.11□□□□□ -1.43
LIMK1P53667 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMK1P53667 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms