Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 OR7E99P-201ENST00000505750 922 ntBASIC6.46□□□□□ -1.38
COPAP53621 ASNSP4-201ENST00000511103 447 ntBASIC6.46□□□□□ -1.38
COPAP53621 RNU6-319P-201ENST00000516025 108 ntBASIC6.46□□□□□ -1.38
COPAP53621 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 TRIM51DP-201ENST00000529746 596 ntBASIC6.46□□□□□ -1.38
COPAP53621 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.46□□□□□ -1.38
COPAP53621 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.46□□□□□ -1.38
COPAP53621 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.46□□□□□ -1.38
COPAP53621 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 BNIP3P27-201ENST00000599991 412 ntBASIC6.46□□□□□ -1.38
COPAP53621 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COPAP53621 MRPL57P1-201ENST00000621486 265 ntBASIC6.46□□□□□ -1.38
COPAP53621 AP003499.2-201ENST00000624100 483 ntBASIC6.46□□□□□ -1.38
COPAP53621 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
COPAP53621 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.46□□□□□ -1.38
COPAP53621 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COPAP53621 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.45□□□□□ -1.38
COPAP53621 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.45□□□□□ -1.38
COPAP53621 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.45□□□□□ -1.38
COPAP53621 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
COPAP53621 SNORD16-201ENST00000362803 99 ntBASIC6.45□□□□□ -1.38
COPAP53621 RNA5SP122-201ENST00000384457 108 ntBASIC6.45□□□□□ -1.38
COPAP53621 AL360271.1-201ENST00000395679 510 ntBASIC6.45□□□□□ -1.38
COPAP53621 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.45□□□□□ -1.38
COPAP53621 REREP1Y-201ENST00000422655 198 ntBASIC6.45□□□□□ -1.38
COPAP53621 RPL7AP14-201ENST00000424041 802 ntBASIC6.45□□□□□ -1.38
COPAP53621 AL157884.1-201ENST00000424561 454 ntBASIC6.45□□□□□ -1.38
COPAP53621 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.45□□□□□ -1.38
COPAP53621 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 REREP2Y-201ENST00000439103 200 ntBASIC6.45□□□□□ -1.38
COPAP53621 EIF5AP4-201ENST00000441206 465 ntBASIC6.45□□□□□ -1.38
COPAP53621 AL158053.1-201ENST00000441503 453 ntBASIC6.45□□□□□ -1.38
COPAP53621 AC016908.1-201ENST00000442571 1219 ntBASIC6.45□□□□□ -1.38
COPAP53621 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.45□□□□□ -1.38
COPAP53621 AC092905.1-201ENST00000467527 949 ntBASIC6.45□□□□□ -1.38
COPAP53621 RN7SL369P-201ENST00000477138 299 ntBASIC6.45□□□□□ -1.38
COPAP53621 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COPAP53621 AC090568.1-201ENST00000509499 856 ntBASIC6.45□□□□□ -1.38
COPAP53621 AC095052.1-201ENST00000509955 863 ntBASIC6.45□□□□□ -1.38
COPAP53621 KHDC1P1-201ENST00000511053 508 ntBASIC6.45□□□□□ -1.38
COPAP53621 RFPL4AP3-201ENST00000515267 345 ntBASIC6.45□□□□□ -1.38
COPAP53621 IGHV4-55-201ENST00000520889 368 ntBASIC6.45□□□□□ -1.38
COPAP53621 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.45□□□□□ -1.38
COPAP53621 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.45□□□□□ -1.38
COPAP53621 CKS1BP1-201ENST00000555221 240 ntBASIC6.45□□□□□ -1.38
COPAP53621 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.45□□□□□ -1.38
COPAP53621 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.45□□□□□ -1.38
COPAP53621 DNAJC19P3-201ENST00000594491 331 ntBASIC6.45□□□□□ -1.38
COPAP53621 AL133247.2-201ENST00000603236 482 ntBASIC6.45□□□□□ -1.38
COPAP53621 SNORA74.4-201ENST00000607595 199 ntBASIC6.45□□□□□ -1.38
COPAP53621 AL355802.4-201ENST00000607635 548 ntBASIC6.45□□□□□ -1.38
COPAP53621 AL365181.4-201ENST00000609800 547 ntBASIC6.45□□□□□ -1.38
COPAP53621 AC021422.1-201ENST00000621212 473 ntBASIC6.45□□□□□ -1.38
COPAP53621 AL355480.1-201ENST00000629041 99 ntBASIC6.45□□□□□ -1.38
COPAP53621 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.45□□□□□ -1.38
COPAP53621 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.45□□□□□ -1.38
COPAP53621 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.45□□□□□ -1.38
COPAP53621 AC073869.7-201ENST00000640874 297 ntBASIC6.45□□□□□ -1.38
COPAP53621 OR7E91P-202ENST00000642062 1198 ntBASIC6.45□□□□□ -1.38
COPAP53621 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.45□□□□□ -1.38
COPAP53621 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COPAP53621 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COPAP53621 AL136984.1-201ENST00000607611 1893 ntBASIC6.45□□□□□ -1.38
COPAP53621 AC010624.4-201ENST00000597606 1351 ntBASIC6.44□□□□□ -1.38
COPAP53621 AC005261.6-201ENST00000623072 1387 ntBASIC6.44□□□□□ -1.38
COPAP53621 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COPAP53621 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 AC010401.2-201ENST00000575137 4934 ntBASIC6.44□□□□□ -1.38
COPAP53621 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms