Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.21□□□□□ -1.42
LHX1P48742 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.21□□□□□ -1.42
LHX1P48742 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.21□□□□□ -1.42
LHX1P48742 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 AC069234.4-201ENST00000621276 412 ntBASIC6.21□□□□□ -1.42
LHX1P48742 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.21□□□□□ -1.42
LHX1P48742 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.21□□□□□ -1.42
LHX1P48742 SNORA17.5-201ENST00000630429 132 ntBASIC6.21□□□□□ -1.42
LHX1P48742 MIR193BHG-214ENST00000641765 509 ntBASIC6.21□□□□□ -1.42
LHX1P48742 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LHX1P48742 RNF19BPY-201ENST00000458209 1550 ntBASIC6.21□□□□□ -1.42
LHX1P48742 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
LHX1P48742 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 KARSP1-201ENST00000451871 1752 ntBASIC6.21□□□□□ -1.42
LHX1P48742 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
LHX1P48742 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 AP000547.3-204ENST00000588548 2523 ntBASIC6.21□□□□□ -1.42
LHX1P48742 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 AP002833.3-201ENST00000625075 2265 ntBASIC6.2□□□□□ -1.42
LHX1P48742 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
LHX1P48742 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LHX1P48742 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.2□□□□□ -1.42
LHX1P48742 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.2□□□□□ -1.42
LHX1P48742 NME1P1-201ENST00000420914 382 ntBASIC6.2□□□□□ -1.42
LHX1P48742 RPL34P3-201ENST00000421454 338 ntBASIC6.2□□□□□ -1.42
LHX1P48742 AL022331.1-201ENST00000429025 477 ntBASIC6.2□□□□□ -1.42
LHX1P48742 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LHX1P48742 AC096775.1-201ENST00000437724 448 ntBASIC6.2□□□□□ -1.42
LHX1P48742 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 OSTCP1-201ENST00000455507 450 ntBASIC6.2□□□□□ -1.42
LHX1P48742 SETP20-201ENST00000457046 852 ntBASIC6.2□□□□□ -1.42
LHX1P48742 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LHX1P48742 AC022215.1-201ENST00000481770 362 ntBASIC6.2□□□□□ -1.42
LHX1P48742 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.2□□□□□ -1.42
LHX1P48742 IGKV3D-34-201ENST00000522638 302 ntBASIC6.2□□□□□ -1.42
LHX1P48742 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.2□□□□□ -1.42
LHX1P48742 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.2□□□□□ -1.42
LHX1P48742 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.2□□□□□ -1.42
LHX1P48742 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.2□□□□□ -1.42
LHX1P48742 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.2□□□□□ -1.42
LHX1P48742 AC006115.2-201ENST00000596823 202 ntBASIC6.2□□□□□ -1.42
LHX1P48742 RN7SL544P-201ENST00000617232 284 ntBASIC6.2□□□□□ -1.42
LHX1P48742 RN7SL763P-201ENST00000620922 284 ntBASIC6.2□□□□□ -1.42
LHX1P48742 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.2□□□□□ -1.42
LHX1P48742 AC103703.1-201ENST00000634783 663 ntBASIC6.2□□□□□ -1.42
LHX1P48742 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.2□□□□□ -1.42
LHX1P48742 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.2□□□□□ -1.42
LHX1P48742 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LHX1P48742 OFD1P17-201ENST00000437639 3018 ntBASIC6.2□□□□□ -1.42
LHX1P48742 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.2□□□□□ -1.42
LHX1P48742 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.2□□□□□ -1.42
LHX1P48742 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LHX1P48742 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 AC005725.1-201ENST00000577346 2607 ntBASIC6.19□□□□□ -1.42
LHX1P48742 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
LHX1P48742 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 TMSB4XP4-201ENST00000323496 618 ntBASIC6.19□□□□□ -1.42
LHX1P48742 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LHX1P48742 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.19□□□□□ -1.42
LHX1P48742 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LHX1P48742 TRAV35-201ENST00000390462 330 ntBASIC6.19□□□□□ -1.42
LHX1P48742 RNA5SP178-201ENST00000410380 128 ntBASIC6.19□□□□□ -1.42
LHX1P48742 AC093155.2-201ENST00000420734 937 ntBASIC6.19□□□□□ -1.42
LHX1P48742 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.19□□□□□ -1.42
LHX1P48742 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.19□□□□□ -1.42
LHX1P48742 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.19□□□□□ -1.42
LHX1P48742 AC015983.1-201ENST00000441577 373 ntBASIC6.19□□□□□ -1.42
LHX1P48742 AL161636.2-201ENST00000445179 927 ntBASIC6.19□□□□□ -1.42
LHX1P48742 LRRC37A14P-201ENST00000452297 462 ntBASIC6.19□□□□□ -1.42
LHX1P48742 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.19□□□□□ -1.42
LHX1P48742 AC079080.1-201ENST00000479841 822 ntBASIC6.19□□□□□ -1.42
LHX1P48742 TRBV5-2-201ENST00000489095 273 ntBASIC6.19□□□□□ -1.42
LHX1P48742 AC104109.1-201ENST00000498563 436 ntBASIC6.19□□□□□ -1.42
LHX1P48742 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.19□□□□□ -1.42
LHX1P48742 SCARNA6.1-201ENST00000516989 238 ntBASIC6.19□□□□□ -1.42
LHX1P48742 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LHX1P48742 AL121594.2-201ENST00000541658 472 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms