Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SCN4AP35499 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 AC010132.2-201ENST00000295493 1043 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SCN4AP35499 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.83□□□□□ -1.32
SCN4AP35499 CEACAMP9-201ENST00000442990 513 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 AC112187.1-201ENST00000455837 479 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 RPS18P6-201ENST00000476880 458 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC073916.1-201ENST00000545095 130 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN4AP35499 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC011840.5-201ENST00000582125 771 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 AC011497.2-201ENST00000600255 639 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 AC010435.1-201ENST00000623353 1177 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
SCN4AP35499 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 AL136981.1-203ENST00000451452 3844 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC006058.1-201ENST00000568686 5067 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN4AP35499 RN7SKP104-201ENST00000362605 328 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 CYB5AP4-201ENST00000396692 399 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 DSTNP5-201ENST00000427921 523 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 OR6D1P-201ENST00000436165 939 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 IGLV2-34-201ENST00000490007 283 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 KCTD9P4-201ENST00000526766 1166 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 OR5AZ1P-201ENST00000527448 943 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC079075.1-201ENST00000559543 878 ntBASIC6.83□□□□□ -1.32
SCN4AP35499 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN4AP35499 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN4AP35499 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN4AP35499 OR9K1P-202ENST00000641111 3217 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN4AP35499 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SCN4AP35499 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 MFSD8-216ENST00000641147 4009 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 ABCA11P-202ENST00000504019 2110 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 AC022819.1-201ENST00000563495 3910 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SCN4AP35499 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SCN4AP35499 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.82□□□□□ -1.32
SCN4AP35499 NENFP1-201ENST00000419476 466 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN4AP35499 SRSF1P1-201ENST00000424058 520 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 AC004129.2-201ENST00000457229 287 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 AC105233.1-201ENST00000498840 781 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
SCN4AP35499 AC063949.1-201ENST00000552900 865 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN4AP35499 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN4AP35499 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN4AP35499 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
SCN4AP35499 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 AL662795.2-201ENST00000624252 3706 ntBASIC6.82□□□□□ -1.32
SCN4AP35499 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN4AP35499 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN4AP35499 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.81□□□□□ -1.32
SCN4AP35499 AC011753.3-201ENST00000443436 406 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms