Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL157702.1-201ENST00000398764 426 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AL132875.1-201ENST00000403623 949 ntBASIC4.16□□□□□ -1.74
CKS2P33552 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.16□□□□□ -1.74
CKS2P33552 AL353133.1-201ENST00000407695 401 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.16□□□□□ -1.74
CKS2P33552 RNF10P1-201ENST00000418589 369 ntBASIC4.16□□□□□ -1.74
CKS2P33552 THEM7P-201ENST00000419556 672 ntBASIC4.16□□□□□ -1.74
CKS2P33552 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 AC094019.1-201ENST00000434678 472 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AL445928.1-201ENST00000435545 222 ntBASIC4.16□□□□□ -1.74
CKS2P33552 RPS12P17-201ENST00000438591 377 ntBASIC4.16□□□□□ -1.74
CKS2P33552 NPM1P23-201ENST00000440193 849 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 PRELID1P3-201ENST00000450055 643 ntBASIC4.16□□□□□ -1.74
CKS2P33552 PCMTD1P3-201ENST00000451824 472 ntBASIC4.16□□□□□ -1.74
CKS2P33552 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 MINOS1P4-201ENST00000515470 318 ntBASIC4.16□□□□□ -1.74
CKS2P33552 TMEM97P2-201ENST00000517841 403 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 RPL41P2-201ENST00000544920 409 ntBASIC4.16□□□□□ -1.74
CKS2P33552 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 AC089984.3-201ENST00000552838 363 ntBASIC4.16□□□□□ -1.74
CKS2P33552 OR4C49P-201ENST00000563891 900 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AC106730.2-201ENST00000566641 540 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.16□□□□□ -1.74
CKS2P33552 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 COX6CP7-201ENST00000597056 208 ntBASIC4.16□□□□□ -1.74
CKS2P33552 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.16□□□□□ -1.74
CKS2P33552 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 AC005355.2-201ENST00000625064 484 ntBASIC4.16□□□□□ -1.74
CKS2P33552 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.15□□□□□ -1.74
CKS2P33552 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.15□□□□□ -1.74
CKS2P33552 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.15□□□□□ -1.74
CKS2P33552 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CKS2P33552 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CKS2P33552 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CKS2P33552 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CKS2P33552 RNA5SP241-201ENST00000391326 114 ntBASIC4.15□□□□□ -1.75
CKS2P33552 MIR1231-201ENST00000408101 92 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS2P33552 MTND2P12-201ENST00000417560 1252 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AL360013.1-201ENST00000419031 858 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AC019205.1-201ENST00000421830 730 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS2P33552 ELOBP4-201ENST00000423418 296 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.15□□□□□ -1.75
CKS2P33552 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS2P33552 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CKS2P33552 OR52U1P-201ENST00000439752 923 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AL592114.2-201ENST00000440142 532 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AC073465.2-201ENST00000440938 498 ntBASIC4.15□□□□□ -1.75
CKS2P33552 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS2P33552 GAPDHP37-201ENST00000442317 968 ntBASIC4.15□□□□□ -1.75
CKS2P33552 TRIM60P16-201ENST00000444048 694 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AL139135.2-201ENST00000445040 433 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS2P33552 OR52E3P-201ENST00000452083 936 ntBASIC4.15□□□□□ -1.75
CKS2P33552 RBMY2EP-202ENST00000456360 940 ntBASIC4.15□□□□□ -1.75
CKS2P33552 NXT1P1-201ENST00000458481 316 ntBASIC4.15□□□□□ -1.75
CKS2P33552 RN7SL372P-201ENST00000461982 298 ntBASIC4.15□□□□□ -1.75
CKS2P33552 RN7SL39P-201ENST00000462264 297 ntBASIC4.15□□□□□ -1.75
CKS2P33552 RPS23P2-201ENST00000463671 415 ntBASIC4.15□□□□□ -1.75
CKS2P33552 RN7SL188P-201ENST00000469842 285 ntBASIC4.15□□□□□ -1.75
CKS2P33552 ATP5LP5-201ENST00000483050 299 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AC023424.1-201ENST00000496058 459 ntBASIC4.15□□□□□ -1.75
CKS2P33552 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS2P33552 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS2P33552 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms