Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC092121.1-201ENST00000569452 202 ntBASIC6.67□□□□□ -1.34
CIITAP33076 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 AL023583.1-201ENST00000607518 1143 ntBASIC6.67□□□□□ -1.34
CIITAP33076 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AL162574.2-201ENST00000614618 657 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AL354696.1-201ENST00000614652 497 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AC005899.7-201ENST00000618199 588 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 AC073592.7-201ENST00000623659 507 ntBASIC6.67□□□□□ -1.34
CIITAP33076 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 AC079753.1-201ENST00000623243 3868 ntBASIC6.67□□□□□ -1.34
CIITAP33076 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.66□□□□□ -1.34
CIITAP33076 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.66□□□□□ -1.34
CIITAP33076 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CIITAP33076 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.66□□□□□ -1.34
CIITAP33076 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 OR52B3P-201ENST00000314715 928 ntBASIC6.66□□□□□ -1.34
CIITAP33076 FUNDC2P3-201ENST00000334716 533 ntBASIC6.66□□□□□ -1.34
CIITAP33076 RPL23AP17-201ENST00000401064 499 ntBASIC6.66□□□□□ -1.34
CIITAP33076 RN7SKP29-201ENST00000410957 272 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.66□□□□□ -1.34
CIITAP33076 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.66□□□□□ -1.34
CIITAP33076 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.66□□□□□ -1.34
CIITAP33076 AP006222.1-205ENST00000450734 457 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.66□□□□□ -1.34
CIITAP33076 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.66□□□□□ -1.34
CIITAP33076 TOMM22P4-201ENST00000511318 336 ntBASIC6.66□□□□□ -1.34
CIITAP33076 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.66□□□□□ -1.34
CIITAP33076 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 AC006518.1-201ENST00000541449 943 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.66□□□□□ -1.34
CIITAP33076 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.66□□□□□ -1.34
CIITAP33076 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.66□□□□□ -1.34
CIITAP33076 ZNF322P1-201ENST00000568013 1209 ntBASIC6.66□□□□□ -1.34
CIITAP33076 GARSP1-201ENST00000570895 719 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AC005224.3-201ENST00000584683 2140 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 AC006115.2-201ENST00000596823 202 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.66□□□□□ -1.34
CIITAP33076 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 AC007620.3-201ENST00000608131 497 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.66□□□□□ -1.34
CIITAP33076 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 AL353684.1-201ENST00000622677 1120 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AL118508.4-201ENST00000624142 1176 ntBASIC6.66□□□□□ -1.34
CIITAP33076 AP000720.1-201ENST00000625091 483 ntBASIC6.66□□□□□ -1.34
CIITAP33076 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.66□□□□□ -1.34
CIITAP33076 OR11H2-202ENST00000641517 1085 ntBASIC6.66□□□□□ -1.34
CIITAP33076 OR8G3P-202ENST00000641572 1255 ntBASIC6.66□□□□□ -1.34
CIITAP33076 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CIITAP33076 AC005725.1-201ENST00000577346 2607 ntBASIC6.66□□□□□ -1.34
CIITAP33076 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.66□□□□□ -1.34
CIITAP33076 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.66□□□□□ -1.34
CIITAP33076 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.65□□□□□ -1.34
CIITAP33076 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.65□□□□□ -1.34
CIITAP33076 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 SNORD1C-201ENST00000363315 78 ntBASIC6.65□□□□□ -1.34
CIITAP33076 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
CIITAP33076 MRPL53P1-201ENST00000414323 319 ntBASIC6.65□□□□□ -1.34
CIITAP33076 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.65□□□□□ -1.34
CIITAP33076 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.65□□□□□ -1.34
CIITAP33076 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.65□□□□□ -1.34
CIITAP33076 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CIITAP33076 AL390879.1-201ENST00000439143 386 ntBASIC6.65□□□□□ -1.34
CIITAP33076 RPL12P11-201ENST00000439970 501 ntBASIC6.65□□□□□ -1.34
CIITAP33076 TAAR4P-201ENST00000454843 1039 ntBASIC6.65□□□□□ -1.34
CIITAP33076 AC093166.4-201ENST00000457867 318 ntBASIC6.65□□□□□ -1.34
CIITAP33076 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.65□□□□□ -1.34
CIITAP33076 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.65□□□□□ -1.34
CIITAP33076 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.65□□□□□ -1.34
CIITAP33076 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CIITAP33076 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.65□□□□□ -1.34
CIITAP33076 MIR2117-201ENST00000516780 80 ntBASIC6.65□□□□□ -1.34
CIITAP33076 AP002981.1-201ENST00000517692 975 ntBASIC6.65□□□□□ -1.34
CIITAP33076 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.65□□□□□ -1.34
CIITAP33076 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.65□□□□□ -1.34
CIITAP33076 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.65□□□□□ -1.34
CIITAP33076 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms