Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN6P29350 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPN6P29350 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 MTCO1P7-201ENST00000419523 1542 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 RNA5SP211-201ENST00000365516 117 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 ZNF619P1-201ENST00000446539 752 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC097463.1-201ENST00000447288 481 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN6P29350 RSU1P1-201ENST00000453416 441 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 FRG2FP-204ENST00000453982 852 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AP002884.1-201ENST00000479691 655 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPN6P29350 RPL38P3-201ENST00000484463 213 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC091544.1-201ENST00000484702 348 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 PFN1P8-201ENST00000497012 543 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPN6P29350 RNU6-943P-201ENST00000516960 98 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.65□□□□□ -1.5
PTPN6P29350 AC078899.1-201ENST00000521432 1185 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC136777.2-201ENST00000522979 358 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPN6P29350 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.65□□□□□ -1.5
PTPN6P29350 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.65□□□□□ -1.5
PTPN6P29350 AC134669.1-201ENST00000581275 672 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.65□□□□□ -1.5
PTPN6P29350 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN6P29350 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN6P29350 AL499605.1-201ENST00000604628 403 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC009237.12-201ENST00000604755 742 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 MIR6778-201ENST00000617912 73 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AC022400.9-201ENST00000623633 273 ntBASIC5.65□□□□□ -1.5
PTPN6P29350 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.65□□□□□ -1.5
PTPN6P29350 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.65□□□□□ -1.51
PTPN6P29350 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.65□□□□□ -1.51
PTPN6P29350 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PTPN6P29350 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN6P29350 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.65□□□□□ -1.51
PTPN6P29350 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN6P29350 IFIT1P1-201ENST00000400497 1449 ntBASIC5.65□□□□□ -1.51
PTPN6P29350 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTPN6P29350 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN6P29350 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 DNM1P47-203ENST00000571780 12667 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN6P29350 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
PTPN6P29350 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 RN7SKP279-201ENST00000411383 298 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 AC117434.1-201ENST00000419971 836 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN6P29350 PNKDP1-201ENST00000435914 430 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 RPS12P17-201ENST00000438591 377 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 PPIAP7-201ENST00000454070 489 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 Z83838.1-202ENST00000456225 839 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 AC009963.3-201ENST00000458090 486 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN6P29350 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN6P29350 RN7SKP35-201ENST00000517210 151 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.64□□□□□ -1.51
PTPN6P29350 AP000620.1-201ENST00000527147 504 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 TOMM20P1-201ENST00000534518 427 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 AC083837.1-201ENST00000565297 2994 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN6P29350 AC091167.5-201ENST00000605689 894 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN6P29350 MIR6071-201ENST00000616741 78 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 FAM27E2-201ENST00000619668 403 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN6P29350 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.64□□□□□ -1.51
PTPN6P29350 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 AC232271.1-201ENST00000602455 2715 ntBASIC5.64□□□□□ -1.51
PTPN6P29350 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN6P29350 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PTPN6P29350 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms