Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.88□□□□□ -1.47
XRCC1P18887 AL583832.1-201ENST00000603227 784 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 AC010809.3-201ENST00000621310 641 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 SAMM50P1-201ENST00000455403 1399 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.88□□□□□ -1.47
XRCC1P18887 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 AF287957.1-201ENST00000607368 1595 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 AC109446.4-201ENST00000623235 2755 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
XRCC1P18887 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 AC004076.2-201ENST00000620532 3323 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.87□□□□□ -1.47
XRCC1P18887 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 BX284632.2-201ENST00000421091 399 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.87□□□□□ -1.47
XRCC1P18887 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.87□□□□□ -1.47
XRCC1P18887 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.87□□□□□ -1.47
XRCC1P18887 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 GEMIN2P1-201ENST00000454246 752 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 ACA64.1-201ENST00000459171 127 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 RN7SL352P-201ENST00000466002 277 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 RN7SL269P-201ENST00000467795 305 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 AC023245.1-201ENST00000468501 517 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 AL122020.1-201ENST00000472287 459 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
XRCC1P18887 WBP1LP3-201ENST00000523033 208 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 AP000648.1-201ENST00000529682 397 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.87□□□□□ -1.47
XRCC1P18887 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.87□□□□□ -1.47
XRCC1P18887 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.87□□□□□ -1.47
XRCC1P18887 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.87□□□□□ -1.47
XRCC1P18887 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.87□□□□□ -1.47
XRCC1P18887 SETP3-201ENST00000581726 813 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.87□□□□□ -1.47
XRCC1P18887 AL031601.1-201ENST00000605702 394 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
XRCC1P18887 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.87□□□□□ -1.47
XRCC1P18887 AL355488.2-201ENST00000609909 2850 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 AL449283.1-201ENST00000602631 3403 ntBASIC5.87□□□□□ -1.47
XRCC1P18887 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
XRCC1P18887 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
XRCC1P18887 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
XRCC1P18887 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
XRCC1P18887 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
XRCC1P18887 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
XRCC1P18887 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
XRCC1P18887 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
XRCC1P18887 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
XRCC1P18887 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
XRCC1P18887 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
XRCC1P18887 LYPLA1P3-201ENST00000402650 695 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 PTCD2P2-201ENST00000415579 1095 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 AL035660.1-201ENST00000422041 222 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.86□□□□□ -1.47
XRCC1P18887 RPL5P2-201ENST00000429598 854 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.86□□□□□ -1.47
XRCC1P18887 AL389925.1-201ENST00000432257 728 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 AL512605.1-202ENST00000441919 381 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 AL359955.2-201ENST00000445380 353 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 AL162739.1-201ENST00000450606 307 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 AC016724.1-201ENST00000453215 421 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
XRCC1P18887 RPL23AP40-201ENST00000487630 390 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.86□□□□□ -1.47
XRCC1P18887 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 AC069542.2-201ENST00000624816 216 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.86□□□□□ -1.47
XRCC1P18887 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms