Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 RPL23P2-201ENST00000320371 421 ntBASIC8.11□□□□□ -1.11
ATF3P18847 RNA5SP131-201ENST00000365452 119 ntBASIC8.11□□□□□ -1.11
ATF3P18847 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 FAR2P1-206ENST00000449736 709 ntBASIC8.11□□□□□ -1.11
ATF3P18847 DAP3-209ENST00000465375 729 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 RPS3AP15-201ENST00000483874 781 ntBASIC8.11□□□□□ -1.11
ATF3P18847 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.11□□□□□ -1.11
ATF3P18847 AC090638.1-201ENST00000498296 909 ntBASIC8.11□□□□□ -1.11
ATF3P18847 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.11□□□□□ -1.11
ATF3P18847 AC105420.1-201ENST00000504389 582 ntBASIC8.11□□□□□ -1.11
ATF3P18847 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC8.11□□□□□ -1.11
ATF3P18847 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.11□□□□□ -1.11
ATF3P18847 GARSP1-201ENST00000570895 719 ntBASIC8.11□□□□□ -1.11
ATF3P18847 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.11□□□□□ -1.11
ATF3P18847 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.11□□□□□ -1.11
ATF3P18847 AC138473.1-201ENST00000605717 526 ntBASIC8.11□□□□□ -1.11
ATF3P18847 SNORA35B-201ENST00000607417 129 ntBASIC8.11□□□□□ -1.11
ATF3P18847 AL118556.2-201ENST00000614375 824 ntBASIC8.11□□□□□ -1.11
ATF3P18847 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC8.11□□□□□ -1.11
ATF3P18847 AC105105.5-201ENST00000622635 1294 ntBASIC8.11□□□□□ -1.11
ATF3P18847 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.11□□□□□ -1.11
ATF3P18847 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.11□□□□□ -1.11
ATF3P18847 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.11□□□□□ -1.11
ATF3P18847 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
ATF3P18847 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
ATF3P18847 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.11□□□□□ -1.11
ATF3P18847 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.1□□□□□ -1.11
ATF3P18847 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.1□□□□□ -1.11
ATF3P18847 GAPDHP42-201ENST00000406848 981 ntBASIC8.1□□□□□ -1.11
ATF3P18847 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.1□□□□□ -1.11
ATF3P18847 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.1□□□□□ -1.11
ATF3P18847 ARL4AP4-201ENST00000434170 518 ntBASIC8.1□□□□□ -1.11
ATF3P18847 OR52B5P-201ENST00000435337 951 ntBASIC8.1□□□□□ -1.11
ATF3P18847 PSMD10P3-201ENST00000437000 448 ntBASIC8.1□□□□□ -1.11
ATF3P18847 AC245047.2-201ENST00000441060 530 ntBASIC8.1□□□□□ -1.11
ATF3P18847 Z80107.2-201ENST00000445127 392 ntBASIC8.1□□□□□ -1.11
ATF3P18847 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ATF3P18847 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.1□□□□□ -1.11
ATF3P18847 RPL7P45-201ENST00000455851 743 ntBASIC8.1□□□□□ -1.11
ATF3P18847 RPL32P33-201ENST00000487023 394 ntBASIC8.1□□□□□ -1.11
ATF3P18847 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ATF3P18847 AC112184.1-201ENST00000505179 312 ntBASIC8.1□□□□□ -1.11
ATF3P18847 AC021678.3-201ENST00000517893 476 ntBASIC8.1□□□□□ -1.11
ATF3P18847 IGHV1-14-201ENST00000523391 241 ntBASIC8.1□□□□□ -1.11
ATF3P18847 HNRNPRP2-201ENST00000528421 743 ntBASIC8.1□□□□□ -1.11
ATF3P18847 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
ATF3P18847 OR8G3P-201ENST00000533406 921 ntBASIC8.1□□□□□ -1.11
ATF3P18847 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.1□□□□□ -1.11
ATF3P18847 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.1□□□□□ -1.11
ATF3P18847 MTCO1P1-201ENST00000624263 1081 ntBASIC8.1□□□□□ -1.11
ATF3P18847 OR52B5P-202ENST00000641118 1110 ntBASIC8.1□□□□□ -1.11
ATF3P18847 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
ATF3P18847 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
ATF3P18847 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.1□□□□□ -1.11
ATF3P18847 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ATF3P18847 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.1□□□□□ -1.11
ATF3P18847 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ATF3P18847 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ATF3P18847 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.09□□□□□ -1.11
ATF3P18847 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.09□□□□□ -1.11
ATF3P18847 GTF2IP4-201ENST00000453092 2054 ntBASIC8.09□□□□□ -1.11
ATF3P18847 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.09□□□□□ -1.11
ATF3P18847 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
ATF3P18847 AC007114.2-201ENST00000576014 4281 ntBASIC8.09□□□□□ -1.11
ATF3P18847 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
ATF3P18847 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ATF3P18847 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.09□□□□□ -1.11
ATF3P18847 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.09□□□□□ -1.11
ATF3P18847 HIGD1AP8-201ENST00000453927 274 ntBASIC8.09□□□□□ -1.11
ATF3P18847 AC090589.1-201ENST00000473109 362 ntBASIC8.09□□□□□ -1.11
ATF3P18847 AC007688.1-201ENST00000475592 759 ntBASIC8.09□□□□□ -1.11
ATF3P18847 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.09□□□□□ -1.11
ATF3P18847 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ATF3P18847 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.09□□□□□ -1.11
ATF3P18847 AP000676.2-201ENST00000529711 301 ntBASIC8.09□□□□□ -1.11
ATF3P18847 AC022832.1-201ENST00000530718 645 ntBASIC8.09□□□□□ -1.11
ATF3P18847 OR4A42P-201ENST00000531397 938 ntBASIC8.09□□□□□ -1.11
ATF3P18847 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ATF3P18847 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.09□□□□□ -1.11
ATF3P18847 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
ATF3P18847 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.09□□□□□ -1.11
ATF3P18847 MIR3691-201ENST00000578066 90 ntBASIC8.09□□□□□ -1.11
ATF3P18847 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms