Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTLA4P16410 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTLA4P16410 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTLA4P16410 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTLA4P16410 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 AL355488.2-201ENST00000609909 2850 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTLA4P16410 TMSB4XP2-201ENST00000335179 210 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 RNA5SP273-201ENST00000362484 113 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 RNU11-201ENST00000387069 134 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTLA4P16410 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTLA4P16410 RPL7P58-201ENST00000402913 758 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 NDUFS5P5-201ENST00000437256 321 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 GAPDHP62-201ENST00000515313 990 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 Vault.2-201ENST00000516519 98 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 SNORA81.2-201ENST00000516868 170 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 AC139697.1-201ENST00000548429 745 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 AC096996.1-201ENST00000563813 325 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.09□□□□□ -1.59
CTLA4P16410 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 AL360012.1-201ENST00000602813 131 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 AC009779.8-202ENST00000607990 932 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 AC015712.7-201ENST00000615211 635 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.09□□□□□ -1.59
CTLA4P16410 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.09□□□□□ -1.59
CTLA4P16410 AL596275.2-207ENST00000641188 675 ntBASIC5.09□□□□□ -1.59
CTLA4P16410 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTLA4P16410 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CTLA4P16410 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CTLA4P16410 AC137056.2-201ENST00000624055 1958 ntBASIC5.09□□□□□ -1.6
CTLA4P16410 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTLA4P16410 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CTLA4P16410 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTLA4P16410 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.08□□□□□ -1.6
CTLA4P16410 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTLA4P16410 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTLA4P16410 AC104964.3-201ENST00000606115 2860 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTLA4P16410 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
CTLA4P16410 RNA5SP477-201ENST00000362639 119 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.08□□□□□ -1.6
CTLA4P16410 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 NIFKP3-201ENST00000417799 865 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC126120.1-201ENST00000431082 470 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC099670.2-201ENST00000435130 321 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.08□□□□□ -1.6
CTLA4P16410 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.08□□□□□ -1.6
CTLA4P16410 RPS23P9-201ENST00000448848 438 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 RPS23P2-201ENST00000463671 415 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.08□□□□□ -1.6
CTLA4P16410 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.08□□□□□ -1.6
CTLA4P16410 Y_RNA.667-201ENST00000516212 107 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 RNA5SP438-201ENST00000516561 112 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 AC011853.1-201ENST00000518911 454 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 HMGN2P36-201ENST00000529541 409 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 AC137627.1-201ENST00000545761 289 ntBASIC5.08□□□□□ -1.6
CTLA4P16410 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.08□□□□□ -1.6
CTLA4P16410 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.08□□□□□ -1.6
CTLA4P16410 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.08□□□□□ -1.6
CTLA4P16410 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms