Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.17□□□□□ -1.42
KRT3P12035 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.17□□□□□ -1.42
KRT3P12035 AL163952.1-202ENST00000569625 600 ntBASIC6.17□□□□□ -1.42
KRT3P12035 MIR4776-2-201ENST00000580204 80 ntBASIC6.17□□□□□ -1.42
KRT3P12035 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.17□□□□□ -1.42
KRT3P12035 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.17□□□□□ -1.42
KRT3P12035 AC125494.2-201ENST00000602431 657 ntBASIC6.17□□□□□ -1.42
KRT3P12035 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.17□□□□□ -1.42
KRT3P12035 MIR7109-201ENST00000613748 65 ntBASIC6.17□□□□□ -1.42
KRT3P12035 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.17□□□□□ -1.42
KRT3P12035 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.17□□□□□ -1.42
KRT3P12035 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
KRT3P12035 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRT3P12035 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRT3P12035 AF287957.1-201ENST00000607368 1595 ntBASIC6.17□□□□□ -1.42
KRT3P12035 AC123769.1-201ENST00000530992 3192 ntBASIC6.17□□□□□ -1.42
KRT3P12035 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRT3P12035 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRT3P12035 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.17□□□□□ -1.42
KRT3P12035 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.17□□□□□ -1.42
KRT3P12035 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.17□□□□□ -1.42
KRT3P12035 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 MSL3P1-202ENST00000440028 1468 ntBASIC6.16□□□□□ -1.42
KRT3P12035 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
KRT3P12035 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
KRT3P12035 TRAV35-201ENST00000390462 330 ntBASIC6.16□□□□□ -1.42
KRT3P12035 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.16□□□□□ -1.42
KRT3P12035 NACAP7-201ENST00000407371 609 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AL590399.2-201ENST00000427536 309 ntBASIC6.16□□□□□ -1.42
KRT3P12035 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.16□□□□□ -1.42
KRT3P12035 KRT8P51-201ENST00000438938 274 ntBASIC6.16□□□□□ -1.42
KRT3P12035 VN1R110P-201ENST00000438988 971 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.16□□□□□ -1.42
KRT3P12035 VN1R96P-201ENST00000446052 858 ntBASIC6.16□□□□□ -1.42
KRT3P12035 FRG2FP-204ENST00000453982 852 ntBASIC6.16□□□□□ -1.42
KRT3P12035 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.16□□□□□ -1.42
KRT3P12035 AC099521.1-201ENST00000482557 334 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.16□□□□□ -1.42
KRT3P12035 SETP21-201ENST00000514799 892 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.16□□□□□ -1.42
KRT3P12035 SCARNA18.1-201ENST00000516330 83 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AC021733.2-201ENST00000518830 497 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.16□□□□□ -1.42
KRT3P12035 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.16□□□□□ -1.42
KRT3P12035 AP000619.2-201ENST00000546014 969 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AC079905.1-201ENST00000549280 475 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.16□□□□□ -1.42
KRT3P12035 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.16□□□□□ -1.42
KRT3P12035 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.16□□□□□ -1.42
KRT3P12035 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.16□□□□□ -1.42
KRT3P12035 AC090826.1-203ENST00000569235 490 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.16□□□□□ -1.42
KRT3P12035 AL133481.2-203ENST00000607558 139 ntBASIC6.16□□□□□ -1.42
KRT3P12035 MIR6793-201ENST00000612376 63 ntBASIC6.16□□□□□ -1.42
KRT3P12035 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.16□□□□□ -1.42
KRT3P12035 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.16□□□□□ -1.42
KRT3P12035 OR11H2-202ENST00000641517 1085 ntBASIC6.16□□□□□ -1.42
KRT3P12035 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.16□□□□□ -1.42
KRT3P12035 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 KYNUP3-201ENST00000574386 1341 ntBASIC6.16□□□□□ -1.42
KRT3P12035 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.16□□□□□ -1.42
KRT3P12035 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRT3P12035 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRT3P12035 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRT3P12035 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.15□□□□□ -1.42
KRT3P12035 AC027088.4-201ENST00000611559 1947 ntBASIC6.15□□□□□ -1.42
KRT3P12035 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AC015799.1-201ENST00000622996 3122 ntBASIC6.15□□□□□ -1.42
KRT3P12035 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRT3P12035 AP004607.3-201ENST00000530354 3915 ntBASIC6.15□□□□□ -1.42
KRT3P12035 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
KRT3P12035 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRT3P12035 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRT3P12035 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRT3P12035 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.15□□□□□ -1.42
KRT3P12035 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
KRT3P12035 RNU11-201ENST00000387069 134 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AL354890.1-201ENST00000413730 346 ntBASIC6.15□□□□□ -1.42
KRT3P12035 CRIP1P1-201ENST00000427567 185 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AC069154.1-201ENST00000432914 542 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.15□□□□□ -1.42
KRT3P12035 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
KRT3P12035 snoU13.29-201ENST00000459370 104 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AL157777.1-201ENST00000468100 304 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AC006539.1-201ENST00000481419 501 ntBASIC6.15□□□□□ -1.42
KRT3P12035 RN7SL193P-201ENST00000491708 276 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.15□□□□□ -1.42
KRT3P12035 RNA5SP473-201ENST00000516402 125 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.15□□□□□ -1.42
KRT3P12035 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.15□□□□□ -1.42
KRT3P12035 AC091078.2-201ENST00000557145 559 ntBASIC6.15□□□□□ -1.42
KRT3P12035 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms