Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC3.49□□□□□ -1.85
PKHD1P08F94 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.49□□□□□ -1.85
PKHD1P08F94 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 IGHVIII-47-1-201ENST00000518187 331 ntBASIC3.49□□□□□ -1.85
PKHD1P08F94 SCARNA9-201ENST00000530422 353 ntBASIC3.49□□□□□ -1.85
PKHD1P08F94 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.49□□□□□ -1.85
PKHD1P08F94 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC3.49□□□□□ -1.85
PKHD1P08F94 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.49□□□□□ -1.85
PKHD1P08F94 AC069213.2-201ENST00000420238 366 ntBASIC3.49□□□□□ -1.85
PKHD1P08F94 AC007064.3-201ENST00000422608 359 ntBASIC3.49□□□□□ -1.85
PKHD1P08F94 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC3.49□□□□□ -1.85
PKHD1P08F94 RPL5P25-201ENST00000441148 775 ntBASIC3.49□□□□□ -1.85
PKHD1P08F94 AC239367.2-201ENST00000447309 705 ntBASIC3.49□□□□□ -1.85
PKHD1P08F94 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.49□□□□□ -1.85
PKHD1P08F94 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.49□□□□□ -1.85
PKHD1P08F94 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKHD1P08F94 ZNF733P-202ENST00000444809 1573 ntBASIC3.49□□□□□ -1.85
PKHD1P08F94 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PKHD1P08F94 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 AL353795.3-201ENST00000624351 5702 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 SELE-204ENST00000367776 3576 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 SELE-205ENST00000367777 3576 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 SNORA37-201ENST00000384504 129 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 MIR23B-201ENST00000384832 97 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC3.48□□□□□ -1.85
PKHD1P08F94 RBMY2TP-201ENST00000451162 947 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AC022034.3-201ENST00000471393 478 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC3.48□□□□□ -1.85
PKHD1P08F94 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC3.48□□□□□ -1.85
PKHD1P08F94 RN7SKP288-201ENST00000516227 268 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 AP006289.1-201ENST00000538089 277 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AC106730.2-201ENST00000566641 540 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AC009597.2-201ENST00000604659 592 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 MIR92B-201ENST00000607575 96 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AC090607.5-201ENST00000615692 224 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 TCL6_3.1-201ENST00000619064 137 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC3.48□□□□□ -1.85
PKHD1P08F94 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
PKHD1P08F94 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.48□□□□□ -1.85
PKHD1P08F94 EEF1A1P1-201ENST00000447052 739 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 HS6ST3-202ENST00000620595 7073 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PKHD1P08F94 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC3.48□□□□□ -1.85
PKHD1P08F94 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.48□□□□□ -1.85
PKHD1P08F94 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PKHD1P08F94 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PKHD1P08F94 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.48□□□□□ -1.85
PKHD1P08F94 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKHD1P08F94 SNORA57.1-201ENST00000391227 145 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.48□□□□□ -1.85
PKHD1P08F94 RN7SKP126-201ENST00000411143 300 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC3.48□□□□□ -1.85
PKHD1P08F94 FTH1P10-202ENST00000430907 550 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 AL136455.1-201ENST00000441083 1240 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 EIF2S2P2-201ENST00000447161 982 ntBASIC3.48□□□□□ -1.85
PKHD1P08F94 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.48□□□□□ -1.85
PKHD1P08F94 AC091167.1-201ENST00000492017 396 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms