Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.82□□□□□ -1.64
CTSDP07339 AL133482.1-201ENST00000415988 498 ntBASIC4.82□□□□□ -1.64
CTSDP07339 RPS4XP5-201ENST00000419038 768 ntBASIC4.82□□□□□ -1.64
CTSDP07339 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.82□□□□□ -1.64
CTSDP07339 Z82198.3-201ENST00000421145 199 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC009784.1-201ENST00000426484 460 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC108479.1-201ENST00000431142 427 ntBASIC4.82□□□□□ -1.64
CTSDP07339 PSMD10P2-201ENST00000432890 672 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AL445928.1-201ENST00000435545 222 ntBASIC4.82□□□□□ -1.64
CTSDP07339 RPL12P18-201ENST00000437175 325 ntBASIC4.82□□□□□ -1.64
CTSDP07339 TRIM60P16-201ENST00000444048 694 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.82□□□□□ -1.64
CTSDP07339 LINC02210-201ENST00000444561 288 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 RPS7P10-201ENST00000464254 603 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC008629.2-201ENST00000503783 483 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC020937.1-201ENST00000519677 1013 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.82□□□□□ -1.64
CTSDP07339 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.82□□□□□ -1.64
CTSDP07339 OR4A17P-201ENST00000526032 904 ntBASIC4.82□□□□□ -1.64
CTSDP07339 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CTSDP07339 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.82□□□□□ -1.64
CTSDP07339 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.82□□□□□ -1.64
CTSDP07339 AL589765.6-201ENST00000601909 549 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC012368.3-201ENST00000604190 219 ntBASIC4.82□□□□□ -1.64
CTSDP07339 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.82□□□□□ -1.64
CTSDP07339 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.82□□□□□ -1.64
CTSDP07339 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AL035661.1-201ENST00000620459 1144 ntBASIC4.82□□□□□ -1.64
CTSDP07339 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.82□□□□□ -1.64
CTSDP07339 AC073488.6-201ENST00000632293 754 ntBASIC4.82□□□□□ -1.64
CTSDP07339 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CTSDP07339 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.82□□□□□ -1.64
CTSDP07339 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 AC093849.1-201ENST00000563631 2209 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC023632.6-201ENST00000624338 2177 ntBASIC4.81□□□□□ -1.64
CTSDP07339 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTSDP07339 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 AC092681.1-201ENST00000297369 291 ntBASIC4.81□□□□□ -1.64
CTSDP07339 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTSDP07339 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTSDP07339 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTSDP07339 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTSDP07339 PRELID1P1-201ENST00000403549 660 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AL132875.1-201ENST00000403623 949 ntBASIC4.81□□□□□ -1.64
CTSDP07339 NPM1P38-201ENST00000403835 865 ntBASIC4.81□□□□□ -1.64
CTSDP07339 SNRPEP6-201ENST00000407465 277 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.81□□□□□ -1.64
CTSDP07339 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.81□□□□□ -1.64
CTSDP07339 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.81□□□□□ -1.64
CTSDP07339 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.81□□□□□ -1.64
CTSDP07339 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.81□□□□□ -1.64
CTSDP07339 NPM1P19-201ENST00000450070 712 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC002553.3-201ENST00000453002 341 ntBASIC4.81□□□□□ -1.64
CTSDP07339 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.81□□□□□ -1.64
CTSDP07339 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.81□□□□□ -1.64
CTSDP07339 AC044810.1-201ENST00000480271 711 ntBASIC4.81□□□□□ -1.64
CTSDP07339 RPS7P6-201ENST00000485777 579 ntBASIC4.81□□□□□ -1.64
CTSDP07339 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 RPS17P5-201ENST00000498293 408 ntBASIC4.81□□□□□ -1.64
CTSDP07339 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.81□□□□□ -1.64
CTSDP07339 AC138832.1-201ENST00000522871 556 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC137627.1-201ENST00000545761 289 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.81□□□□□ -1.64
CTSDP07339 GARSP1-201ENST00000570895 719 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.81□□□□□ -1.64
CTSDP07339 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 AC063977.7-201ENST00000594454 337 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.81□□□□□ -1.64
CTSDP07339 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 HTR1DP1-201ENST00000616500 888 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AL122023.1-201ENST00000622847 530 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CTSDP07339 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTSDP07339 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.81□□□□□ -1.64
CTSDP07339 GNL2P1-201ENST00000451274 2190 ntBASIC4.81□□□□□ -1.64
CTSDP07339 AC083899.1-201ENST00000454465 3819 ntBASIC4.81□□□□□ -1.64
CTSDP07339 ABCC13-202ENST00000463099 3842 ntBASIC4.81□□□□□ -1.64
CTSDP07339 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms