Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 AL391261.1-201ENST00000555712 1479 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 CTAGE11P-201ENST00000451540 2353 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDGFAP04085 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDGFAP04085 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDGFAP04085 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDGFAP04085 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.17□□□□□ -1.26
PDGFAP04085 AC245052.5-201ENST00000416320 649 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 PPIAP23-201ENST00000420099 497 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDGFAP04085 USP9YP18-201ENST00000425912 695 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDGFAP04085 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 MTND1P28-201ENST00000435623 950 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 PPIAP17-201ENST00000438507 471 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AL512286.1-201ENST00000439244 400 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.17□□□□□ -1.26
PDGFAP04085 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.17□□□□□ -1.26
PDGFAP04085 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.17□□□□□ -1.26
PDGFAP04085 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDGFAP04085 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 RN7SL861P-201ENST00000473793 285 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.17□□□□□ -1.26
PDGFAP04085 RNA5SP101-201ENST00000517036 108 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 IGHV7-40-201ENST00000520963 296 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.17□□□□□ -1.26
PDGFAP04085 ADI1P3-201ENST00000549509 470 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 OR4N1P-201ENST00000554847 949 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AC044860.3-201ENST00000559957 368 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.17□□□□□ -1.26
PDGFAP04085 GLUD1P2-201ENST00000583339 201 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 GLUD1P8-201ENST00000585063 203 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.17□□□□□ -1.26
PDGFAP04085 AL021918.1-201ENST00000603933 236 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AC140658.6-201ENST00000603958 201 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 IMMP1LP1-201ENST00000605170 488 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AC244100.4-201ENST00000617747 388 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AC016717.3-201ENST00000624730 554 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 AC093909.6-201ENST00000624757 775 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 OR5H6-203ENST00000642105 978 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PDGFAP04085 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.17□□□□□ -1.26
PDGFAP04085 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 TEX21P-201ENST00000447107 1476 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 OR7E11P-202ENST00000642027 1491 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 ELF2P3-201ENST00000445099 1506 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 CR383658.2-201ENST00000547576 1525 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
PDGFAP04085 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
PDGFAP04085 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PDGFAP04085 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
PDGFAP04085 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDGFAP04085 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms