Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AP000547.1-201ENST00000454360 617 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AC005532.2-201ENST00000467154 373 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 DUTP1-201ENST00000493631 470 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.92□□□□□ -1.3
COL1A1P02452 OR5M14P-201ENST00000506803 618 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 HIGD1AP14-201ENST00000507617 282 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.92□□□□□ -1.3
COL1A1P02452 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.92□□□□□ -1.3
COL1A1P02452 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL1A1P02452 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL1A1P02452 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL1A1P02452 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL1A1P02452 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.91□□□□□ -1.3
COL1A1P02452 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL1A1P02452 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL1A1P02452 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL1A1P02452 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.91□□□□□ -1.3
COL1A1P02452 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL1A1P02452 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL1A1P02452 RNA5SP507-201ENST00000363603 121 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 RPL35AP24-201ENST00000413846 330 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL1A1P02452 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.91□□□□□ -1.3
COL1A1P02452 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.91□□□□□ -1.3
COL1A1P02452 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.91□□□□□ -1.3
COL1A1P02452 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.91□□□□□ -1.3
COL1A1P02452 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.91□□□□□ -1.3
COL1A1P02452 AC024558.1-201ENST00000505008 528 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 IGLV3-24-201ENST00000517477 197 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.91□□□□□ -1.3
COL1A1P02452 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.91□□□□□ -1.3
COL1A1P02452 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.91□□□□□ -1.3
COL1A1P02452 AL390726.5-202ENST00000564800 256 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 RBM22P12-201ENST00000567098 1255 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.91□□□□□ -1.3
COL1A1P02452 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 AC005840.5-201ENST00000619166 599 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 AL390318.1-201ENST00000624564 687 ntBASIC6.91□□□□□ -1.3
COL1A1P02452 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.91□□□□□ -1.3
COL1A1P02452 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.91□□□□□ -1.3
COL1A1P02452 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL1A1P02452 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.9□□□□□ -1.3
COL1A1P02452 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL1A1P02452 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.9□□□□□ -1.3
COL1A1P02452 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.9□□□□□ -1.3
COL1A1P02452 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL1A1P02452 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL1A1P02452 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
COL1A1P02452 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL1A1P02452 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.9□□□□□ -1.31
COL1A1P02452 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
COL1A1P02452 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL1A1P02452 RNA5SP443-201ENST00000363083 132 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.9□□□□□ -1.31
COL1A1P02452 AL645927.1-201ENST00000396783 406 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 AL121835.1-201ENST00000404250 354 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 GAPDHP42-201ENST00000406848 981 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 RMRPP5-201ENST00000411156 267 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 AK3P5-201ENST00000432033 519 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.9□□□□□ -1.31
COL1A1P02452 AC004815.1-201ENST00000484185 331 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.9□□□□□ -1.31
COL1A1P02452 AC126615.2-201ENST00000553003 515 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 SUGT1P3-202ENST00000604259 383 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 AL118522.2-201ENST00000616045 615 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
COL1A1P02452 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.9□□□□□ -1.31
COL1A1P02452 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
COL1A1P02452 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL1A1P02452 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
COL1A1P02452 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.9□□□□□ -1.31
COL1A1P02452 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.9□□□□□ -1.31
COL1A1P02452 AC005225.5-201ENST00000623547 2225 ntBASIC6.9□□□□□ -1.31
COL1A1P02452 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 AC022164.1-201ENST00000568767 2673 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.89□□□□□ -1.31
COL1A1P02452 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL1A1P02452 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.89□□□□□ -1.31
COL1A1P02452 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.89□□□□□ -1.31
COL1A1P02452 AL139148.1-201ENST00000427122 680 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 USP24P1-201ENST00000433802 779 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.89□□□□□ -1.31
COL1A1P02452 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.89□□□□□ -1.31
COL1A1P02452 RN7SL172P-201ENST00000460535 303 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.89□□□□□ -1.31
COL1A1P02452 RNA5SP92-201ENST00000516437 110 ntBASIC6.89□□□□□ -1.31
COL1A1P02452 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.89□□□□□ -1.31
COL1A1P02452 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms