Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHOX2O60902 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHOX2O60902 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHOX2O60902 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.81□□□□□ -1.48
SHOX2O60902 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHOX2O60902 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SHOX2O60902 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHOX2O60902 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SHOX2O60902 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.8□□□□□ -1.48
SHOX2O60902 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHOX2O60902 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHOX2O60902 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 AC119674.1-202ENST00000641333 1860 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHOX2O60902 RNA5SP346-201ENST00000363541 121 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 AC006509.1-201ENST00000420788 634 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 FAM183DP-201ENST00000421987 399 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 HSPE1P16-201ENST00000426640 348 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.8□□□□□ -1.48
SHOX2O60902 HSPD1P12-201ENST00000429127 1069 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 VN1R53P-201ENST00000429536 957 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 AC112492.2-201ENST00000432774 1030 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 PSMD8P1-201ENST00000436275 769 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHOX2O60902 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.8□□□□□ -1.48
SHOX2O60902 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 AC015983.1-201ENST00000441577 373 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 COL11A2P1-205ENST00000441798 676 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 AC097359.1-201ENST00000447946 463 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHOX2O60902 RN7SL372P-201ENST00000461982 298 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 RPS7P6-201ENST00000485777 579 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.8□□□□□ -1.48
SHOX2O60902 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.8□□□□□ -1.48
SHOX2O60902 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.8□□□□□ -1.48
SHOX2O60902 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.8□□□□□ -1.48
SHOX2O60902 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.8□□□□□ -1.48
SHOX2O60902 AC130366.1-201ENST00000526505 1192 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.8□□□□□ -1.48
SHOX2O60902 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.8□□□□□ -1.48
SHOX2O60902 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SHOX2O60902 OR4C49P-201ENST00000563891 900 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 SYPL1P2-201ENST00000582878 727 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHOX2O60902 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHOX2O60902 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SHOX2O60902 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
SHOX2O60902 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHOX2O60902 AC079097.1-201ENST00000512187 1399 ntBASIC5.8□□□□□ -1.48
SHOX2O60902 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHOX2O60902 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.79□□□□□ -1.48
SHOX2O60902 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHOX2O60902 AC093849.1-201ENST00000563631 2209 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHOX2O60902 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHOX2O60902 AL121886.1-201ENST00000358609 435 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.79□□□□□ -1.48
SHOX2O60902 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHOX2O60902 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHOX2O60902 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHOX2O60902 MRPL32P1-201ENST00000406301 247 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHOX2O60902 AL589794.1-201ENST00000424971 390 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHOX2O60902 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHOX2O60902 AL356121.1-201ENST00000442911 156 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC073909.1-201ENST00000447112 999 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC009244.1-201ENST00000450566 258 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AL079303.1-201ENST00000486611 463 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.79□□□□□ -1.48
SHOX2O60902 AC009567.2-201ENST00000502989 349 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 MYL12BP2-201ENST00000503948 512 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC105384.2-201ENST00000508433 640 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.79□□□□□ -1.48
SHOX2O60902 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
SHOX2O60902 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 AC027369.5-201ENST00000533838 755 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.79□□□□□ -1.48
SHOX2O60902 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.79□□□□□ -1.48
SHOX2O60902 AC114947.2-201ENST00000565748 2125 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.79□□□□□ -1.48
SHOX2O60902 AC012175.1-201ENST00000603755 531 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 SNORA74.4-201ENST00000607595 199 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.79□□□□□ -1.48
SHOX2O60902 AP000894.4-201ENST00000610185 483 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 AC096861.1-201ENST00000616652 240 ntBASIC5.79□□□□□ -1.48
SHOX2O60902 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms