Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 PARP4P2-201ENST00000446672 3326 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AC016745.2-201ENST00000608834 3443 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 NCOA4P2-201ENST00000340589 1813 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 AC006206.1-201ENST00000544842 3387 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AF287957.1-201ENST00000607368 1595 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
UPK1AO00322 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 RNA5SP91-201ENST00000390902 119 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 TUBB4BP6-201ENST00000437576 479 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.48□□□□□ -1.53
UPK1AO00322 CTSLP6-201ENST00000458273 1002 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AL157777.1-201ENST00000468100 304 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.48□□□□□ -1.53
UPK1AO00322 LSM3P4-201ENST00000502948 309 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AC105420.1-201ENST00000504389 582 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.48□□□□□ -1.53
UPK1AO00322 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.48□□□□□ -1.53
UPK1AO00322 GAPDHP62-201ENST00000515313 990 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 SCARNA18.1-201ENST00000516330 83 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.48□□□□□ -1.53
UPK1AO00322 AC011853.1-201ENST00000518911 454 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.48□□□□□ -1.53
UPK1AO00322 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.48□□□□□ -1.53
UPK1AO00322 AC084824.2-201ENST00000548906 345 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.48□□□□□ -1.53
UPK1AO00322 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.48□□□□□ -1.53
UPK1AO00322 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.48□□□□□ -1.53
UPK1AO00322 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 MIR4776-2-201ENST00000580204 80 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.48□□□□□ -1.53
UPK1AO00322 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 MIR6793-201ENST00000612376 63 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AL139099.4-201ENST00000614802 114 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 AC007786.3-201ENST00000615154 596 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 MIR6133-201ENST00000617057 108 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 OR11H2-202ENST00000641517 1085 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.48□□□□□ -1.53
UPK1AO00322 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.48□□□□□ -1.53
UPK1AO00322 AL137058.3-201ENST00000624531 3099 ntBASIC5.48□□□□□ -1.53
UPK1AO00322 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
UPK1AO00322 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.48□□□□□ -1.53
UPK1AO00322 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UPK1AO00322 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
UPK1AO00322 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 AP001029.2-203ENST00000589795 4910 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UPK1AO00322 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UPK1AO00322 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UPK1AO00322 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.47□□□□□ -1.53
UPK1AO00322 VN1R110P-201ENST00000438988 971 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC023141.8-201ENST00000442554 208 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 AC004129.2-201ENST00000457229 287 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC006539.1-201ENST00000481419 501 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 RN7SL193P-201ENST00000491708 276 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.47□□□□□ -1.53
UPK1AO00322 RNA5SP473-201ENST00000516402 125 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC079905.1-201ENST00000549280 475 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.47□□□□□ -1.53
UPK1AO00322 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC091078.2-201ENST00000557145 559 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 AC019322.1-201ENST00000571869 389 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms