Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 RNA5SP375-201ENST00000362975 119 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 TMA16P2-201ENST00000413187 601 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 CBX1P3-201ENST00000413296 527 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC009963.4-201ENST00000448535 339 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 RPS27AP3-201ENST00000453803 454 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC073594.1-201ENST00000462065 364 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AP002371.1-201ENST00000463604 433 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 KCTD9P6-201ENST00000522306 950 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC234775.3-201ENST00000564612 656 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC092121.1-201ENST00000569452 202 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC010547.7-201ENST00000570323 333 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AC012146.2-201ENST00000576545 416 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AP005119.1-201ENST00000580956 292 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 OR7A1P-202ENST00000641542 1158 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 KARSP1-201ENST00000451871 1752 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 MSL3P1-202ENST00000440028 1468 ntBASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AL929601.4-201ENST00000613011 1341 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AL353763.1-201ENST00000624467 1628 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AL031985.1-201ENST00000392713 418 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AL360271.1-201ENST00000395679 510 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AL096829.1-201ENST00000413677 457 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 RPL12P12-201ENST00000424633 501 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC104843.2-201ENST00000427666 297 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 TRIM60P16-201ENST00000444048 694 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 RPL31P15-201ENST00000449770 338 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC112187.1-201ENST00000455837 479 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 RPL5P16-201ENST00000471467 790 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 PSMA2P2-201ENST00000504319 686 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 SNORD46.2-201ENST00000516021 102 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC022826.1-201ENST00000519383 805 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC115989.2-201ENST00000578640 563 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC087468.1-201ENST00000604365 630 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AL137067.2-201ENST00000621202 131 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AC087821.1-201ENST00000623639 567 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 AP003400.2-201ENST00000624036 666 ntBASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPIPA2E9PIF3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms