Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC062029.1-202ENST00000606164 3651 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC024587.1-201ENST00000505925 2157 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 OLMALINC-203ENST00000641087 3779 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 RNA5SP273-201ENST00000362484 113 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 MIR421-201ENST00000365696 85 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 RAB9AP4-201ENST00000415230 609 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 GTF3AP1-201ENST00000416942 1004 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC073109.1-201ENST00000445066 978 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 ZNF619P1-201ENST00000446539 752 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 OR2AF1P-201ENST00000454899 889 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 EIF2S2P4-201ENST00000461070 984 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC092865.4-201ENST00000477936 615 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 RNA5SP438-201ENST00000516561 112 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 IGKV3D-34-201ENST00000522638 302 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC068305.2-201ENST00000550567 1205 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AP005119.1-201ENST00000580956 292 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC091193.1-201ENST00000604640 448 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AP006248.3-201ENST00000623580 594 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AL590396.2-201ENST00000636511 1041 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 OR7A1P-202ENST00000641542 1158 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC009779.8-201ENST00000641684 4384 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC091305.2-201ENST00000624049 1576 ntBASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TBC1D3FA6NER0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 RNA5SP375-201ENST00000362975 119 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AL096829.1-201ENST00000413677 457 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 CYP4F30P-202ENST00000420048 405 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC097721.1-201ENST00000427150 1253 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC073508.1-201ENST00000428866 656 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 MTCO1P45-201ENST00000431457 267 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC009963.4-201ENST00000448535 339 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC104629.1-201ENST00000494226 508 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC108157.1-201ENST00000510511 539 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC114781.3-201ENST00000512083 142 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 MTATP6P1-201ENST00000514057 681 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC092121.1-201ENST00000569452 202 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms