Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 OR9G4-201ENST00000302957 984 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 Y_RNA.9-201ENST00000362354 101 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 Y_RNA.18-201ENST00000362461 102 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 SNORD46-201ENST00000364043 104 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AL355862.1-201ENST00000412705 353 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 TPT1P2-201ENST00000413105 503 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AL022100.1-202ENST00000421214 548 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 RPS7P12-201ENST00000422385 582 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AL513174.1-201ENST00000423182 629 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 LIN28AP2-201ENST00000445283 458 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 SS18L2P1-201ENST00000445923 213 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 RPS20P24-201ENST00000457473 361 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 RN7SL751P-201ENST00000473281 284 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 UBTFL6-201ENST00000477929 1024 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC097263.1-201ENST00000496795 606 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC079395.1-201ENST00000510981 262 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC109445.1-201ENST00000512356 383 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 IGKV2-29-201ENST00000521304 372 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC138749.2-201ENST00000566048 167 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AL353726.1-201ENST00000614041 1000 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 FAM27E3-202ENST00000614611 340 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC073569.3-201ENST00000619055 682 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC025162.2-201ENST00000619602 560 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 PART1_3.1-201ENST00000619680 131 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC099667.1-201ENST00000624222 469 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AC009033.1-201ENST00000624279 431 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 MFSD8-245ENST00000641743 948 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 WASF5P-205ENST00000428639 1455 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 KARSP1-201ENST00000451871 1752 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 AP005901.5-201ENST00000545779 1796 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 MAPK10-333ENST00000641607 2481 ntBASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
PCDHGC4Q9Y5F7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.52□□□□□ -1.2
PCDHGC4Q9Y5F7 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGC4Q9Y5F7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGC4Q9Y5F7 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGC4Q9Y5F7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGC4Q9Y5F7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGC4Q9Y5F7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGC4Q9Y5F7 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 AC010886.1-201ENST00000437380 2869 ntBASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 SNORA73B-201ENST00000363217 204 ntBASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 RNA5SP260-201ENST00000363849 111 ntBASIC7.52□□□□□ -1.21
PCDHGC4Q9Y5F7 RN7SKP1-201ENST00000365525 307 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms