Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 AC117529.2-201ENST00000512159 2068 ntBASIC10.22□□□□□ -0.77
PHF8Q9UPP1 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 MTCO1P11-201ENST00000429111 1528 ntBASIC10.22□□□□□ -0.77
PHF8Q9UPP1 CR383658.2-201ENST00000547576 1525 ntBASIC10.22□□□□□ -0.77
PHF8Q9UPP1 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PHF8Q9UPP1 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 LRRC37A11P-202ENST00000579258 3717 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 Y_RNA.144-201ENST00000363521 113 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 Y_RNA.216-201ENST00000364205 93 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 RNU6-738P-201ENST00000384531 106 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 SNORA11.3-201ENST00000408471 128 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 RN7SKP207-201ENST00000411204 303 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 RPL17P12-201ENST00000413391 526 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AL009174.1-201ENST00000426577 416 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 MTCO1P3-201ENST00000429327 192 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 FUNDC2P2-202ENST00000443452 493 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 SS18L2P1-201ENST00000445923 213 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC115223.1-201ENST00000466377 870 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC105918.1-201ENST00000474399 838 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 CCDC11P1-201ENST00000503137 1162 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 SCARNA18.2-201ENST00000516882 84 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 CR383656.6-201ENST00000550518 394 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC015917.1-201ENST00000579654 510 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC233280.2-201ENST00000603917 1070 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 MIR6885-201ENST00000612241 66 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 SNORA11.6-201ENST00000619030 128 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC211433.3-201ENST00000623770 375 ntBASIC10.21□□□□□ -0.77
PHF8Q9UPP1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC10.21□□□□□ -0.77
PHF8Q9UPP1 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 AL031123.2-201ENST00000563225 3325 ntBASIC10.21□□□□□ -0.78
PHF8Q9UPP1 NCOA4P2-201ENST00000340589 1813 ntBASIC10.21□□□□□ -0.78
PHF8Q9UPP1 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PHF8Q9UPP1 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 SLC9B1P1-201ENST00000331172 1337 ntBASIC10.2□□□□□ -0.78
PHF8Q9UPP1 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 RNU6-1090P-201ENST00000364065 94 ntBASIC10.2□□□□□ -0.78
PHF8Q9UPP1 RNU6-660P-201ENST00000364566 109 ntBASIC10.2□□□□□ -0.78
PHF8Q9UPP1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 MIR187-201ENST00000385062 109 ntBASIC10.2□□□□□ -0.78
PHF8Q9UPP1 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 RAB5CP1-201ENST00000395972 580 ntBASIC10.2□□□□□ -0.78
PHF8Q9UPP1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC10.2□□□□□ -0.78
PHF8Q9UPP1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms