Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 MIR4429-201ENST00000580105 73 ntBASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 AC009120.2-204ENST00000621548 2032 ntBASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 AC105749.1-201ENST00000631338 2008 ntBASIC8.92□□□□□ -0.98
RIMBP3Q9UFD9 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AL590399.4-201ENST00000436561 601 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 OR8B1P-202ENST00000641132 1178 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AC096921.2-201ENST00000561507 1916 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AL133388.1-201ENST00000404509 287 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 OR4K12P-201ENST00000406538 961 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 DNAJA1P6-201ENST00000437347 354 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 MIR4277-201ENST00000578298 84 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 MIR4311-201ENST00000580794 100 ntBASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RIMBP3Q9UFD9 AL132640.2-201ENST00000559968 1698 ntBASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 AC140479.2-201ENST00000421567 3130 ntBASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RIMBP3Q9UFD9 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 SNORA37-201ENST00000384504 129 ntBASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 AC093655.2-201ENST00000425735 631 ntBASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 AC011487.3-201ENST00000593607 453 ntBASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 AC125494.2-201ENST00000602431 657 ntBASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RIMBP3Q9UFD9 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 MFSD8-220ENST00000641243 1422 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 RNA5SP44-201ENST00000410446 133 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 RN7SKP263-201ENST00000411194 309 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 RPS27AP7-201ENST00000422792 455 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms