Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AL512422.1-201ENST00000407033 553 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 RNA5SP178-201ENST00000410380 128 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AK4P4-201ENST00000419465 646 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 CHEK2P5-201ENST00000423877 246 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AL731534.1-201ENST00000434711 269 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 HMGN1P36-201ENST00000446623 298 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 PPIAP20-201ENST00000449839 135 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 ACA64.4-201ENST00000459070 127 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 NENFP3-201ENST00000503735 313 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC091078.2-201ENST00000557145 559 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AL049840.6-201ENST00000604583 345 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AL139041.1-201ENST00000605480 610 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC145423.1-201ENST00000605712 336 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 MIR4302-201ENST00000638058 60 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC079753.1-201ENST00000623243 3868 ntBASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.26□□□□□ -1.57
CLCF1Q9UBD9 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC087752.1-201ENST00000391360 558 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC093155.2-201ENST00000420734 937 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC127526.2-201ENST00000426436 775 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AL663074.2-201ENST00000440621 479 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AL035690.1-201ENST00000490892 383 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC135626.1-201ENST00000556983 435 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 GARSP1-201ENST00000570895 719 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 RN7SL753P-201ENST00000581238 290 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC011445.2-201ENST00000599274 173 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC126175.1-201ENST00000617041 758 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AC063952.1-203ENST00000634410 658 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 AL121768.1-201ENST00000613917 2544 ntBASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCF1Q9UBD9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms