Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AL353763.1-201ENST00000624467 1628 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AC004690.1-201ENST00000418216 328 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 RPS27AP7-201ENST00000422792 455 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AL022319.1-201ENST00000458183 1167 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AC095055.1-201ENST00000603472 1113 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AL590392.1-201ENST00000604960 446 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AC114876.1-201ENST00000490962 1366 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 RHOT1P3-201ENST00000436571 331 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 Z92846.1-201ENST00000456203 268 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 RPS23P7-201ENST00000466210 444 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 RN7SKP99-201ENST00000517028 307 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC021006.3-201ENST00000530771 192 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC027334.1-201ENST00000603257 310 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 RPS23P2-201ENST00000463671 415 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC004980.4-201ENST00000513375 203 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC090424.1-201ENST00000535243 736 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC073575.2-201ENST00000614212 627 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 OR52H1-202ENST00000641796 1061 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 RPL32P3-201ENST00000359025 275 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AL161747.1-201ENST00000480068 358 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AL110118.1-201ENST00000553543 400 ntBASIC5.79□□□□□ -1.48
CHD7Q9P2D1 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD7Q9P2D1 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AL078599.1-201ENST00000402075 293 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 RN7SKP151-201ENST00000410230 316 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 RN7SKP100-201ENST00000411258 284 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AL162739.1-201ENST00000450606 307 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AL450226.2-201ENST00000622913 439 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 CDY5P-201ENST00000411487 1580 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 CDY9P-201ENST00000451397 1580 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AC013268.3-201ENST00000262716 2324 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 ERG-204ENST00000398907 4809 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 DDX39BP1-205ENST00000422507 192 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 RPL18P10-201ENST00000425606 538 ntBASIC5.78□□□□□ -1.48
CHD7Q9P2D1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD7Q9P2D1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms